Jatropha Genome Database
- JcCB0103411.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0103411.10 + phase: 0 /partial
(971 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c04354 1245 0.0
>KJC_c04354
Length = 1399
Score = 1245 bits (628), Expect = 0.0
Identities = 642/644 (99%), Gaps = 2/644 (0%)
Strand = Plus / Minus
Query: 328 tatcttggctttgctgcagcagatgagtactgcacacctcgagtaattgagtcgttaaag 387
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1399 tatcttggctttgctgcagcagatgagtactgcacacctcgagtaattgagtcgttaaag 1340
Query: 388 aaatattctcctagcacttgtagcagtcgggtggatgcaggtacaacggcattgcataat 447
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1339 aaatattctcctagcacttgtagcagtcgg-tggatgcaggtacaacggcattgcataat 1281
Query: 448 gaattggagaagtgtgttgctgattttgttggaaaaccagcagctattgtttttggcatg 507
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1280 gaattggagaagtgtgttgctgattttgttggaaaaccagcagctattgtttttggcatg 1221
Query: 508 ggctatgttacaaactctgctatacttcctgtcctcattgggaagggtggtttgattatc 567
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1220 ggctatgttacaaactctgctatacttcctgtcctcattgggaagggtggtttgattatc 1161
Query: 568 agtgattctttgaaccataattctatagtcaatggcgcccgtggatctggagctactatt 627
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1160 agtgattctttgaaccataattctatagtcaatggcgcccgtggatctggagctactatt 1101
Query: 628 cgtgtttttcaacacaacacaccctctcatttggaggaagtcttaagagaacaaattgca 687
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1100 cgtgtttttcaacacaacacaccctctcatttggaggaagtcttaagagaacaaattgca 1041
Query: 688 gatggacaacctaggactcacagaccttggaagaaaataattgtaattgtggaggggata 747
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1040 gatggacaacctaggactcacagaccttggaagaaaataattgtaattgt-gaggggata 982
Query: 748 tacagcatggaaggggagctttgcaaacttcctgagatcatagcaatctgcaaaaaatat 807
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 981 tacagcatggaaggggagctttgcaaacttcctgagatcatagcaatctgcaaaaaatat 922
Query: 808 aaggcatatacatacttggatgaggctcatagcattggtgcagtagggaaatcaggaaga 867
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 921 aaggcatatacatacttggatgaggctcatagcattggtgcagtagggaaatcaggaaga 862
Query: 868 ggcgtttgtgagctcctaggagtggatactgctgatgtggatatcatgatgggaactttt 927
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 861 ggcgtttgtgagctcctaggagtggatactgctgatgtggatatcatgatgggaactttt 802
Query: 928 actaaatcatttgggtcatgtggtggatatattgctgggtcaaa 971
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 actaaatcatttgggtcatgtggtggatatattgctgggtcaaa 758