Jatropha Genome Database
- JcCB0102271.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0102271.10 + phase: 1 /partial
(2132 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c07153 848 0.0
KJC_c10981 109 3e-23
>KJC_c07153
Length = 458
Score = 848 bits (428), Expect = 0.0
Identities = 456/460 (99%), Gaps = 4/460 (0%)
Strand = Plus / Plus
Query: 1491 gcttacctccatgaagattgtgatgtaaagattattcattgtgacataaaacctgaaaac 1550
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcttacctccatgaagattgtgatgtaaagattattcattgtgacataaaacctgaaaac 60
Query: 1551 gtgcttcttgatgatcatttccttgctaaagtatcagattttgggttggcaaagttaatg 1610
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gtgcttcttgatgatcatttccttgctaaagtatcagattttgggttggcaaagttaatg 120
Query: 1611 aatagagagcaaagccatgttttcacaaccatgagaggcaccaggggataccttgcacca 1670
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aatagagagcaaagccatgttttcacaaccatgagaggcaccaggggataccttgcacca 180
Query: 1671 gaatggatcacaaattatgccatatcagagaaaagtgatgtttatagctatgggatgttg 1730
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 181 gaatggatcacaaattatgccatatcagag-aaagtgatgtttatagctatgggatgttg 239
Query: 1731 ttgcttgagattattggtggaaggaaaaactttaacccaaccgaatcttctgagaaatcc 1790
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 ttgcttgagattattggtggaaggaaaaactttaacccaaccgaatcttctgagaaatcc 299
Query: 1791 catttcccatcttatgcttttaagatgatggaagaagggaaactgagagaaatccttgat 1850
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 catttcccatcttatgc-tttaagatgatggaagaagggaaactgagagaaatccttgat 358
Query: 1851 tcagagctgaaattcgat-gaaaacgacaagagggtatcgactgctattaaagttgcatt 1909
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 tcagagctgaaattcgatagaaaacgacaagagggtatcgactgctattaaagttgcatt 418
Query: 1910 gtggtgtatacaagaagata-tgggtctgaggccatcaat 1948
|||||||||||||||||||| |||||||||||||||||||
Sbjct: 419 gtggtgtatacaagaagatagtgggtctgaggccatcaat 458
>KJC_c10981
Length = 661
Score = 109 bits (55), Expect = 3e-23
Identities = 145/175 (82%)
Strand = Plus / Minus
Query: 1245 aaattggaaggtattggtcaggggaagaaagaattccgagctgaagttagtatcattggt 1304
||||||||||| ||||| || ||||||||||| || |||||||||| |||||||| |||
Sbjct: 245 aaattggaaggcattggacaagggaagaaagagtttagagctgaagtgagtatcatcggt 186
Query: 1305 agtattcatcaccaccacctggttaggcttaaaggcttctgtgctgaaggaactcaccgt 1364
||||| ||||| ||| |||| | ||| |||||||| |||||| |||| |||| ||
Sbjct: 185 agtatccatcatgtccatttggtcaagctcaaaggcttttgtgctcaagggtctcatcgg 126
Query: 1365 ctgcttgcttatgagttcatggcaaatgggtctctggataaatggatcttcaaga 1419
|| |||| ||||||||||||| ||| |||||| | |||||||||||||||||||
Sbjct: 125 cttcttgtttatgagttcatgagaaaagggtctttagataaatggatcttcaaga 71