Jatropha Genome Database

JcCB0102141.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0102141.10 - phase: 0 /partial
         (475 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c02904                                                            914   0.0  

>KJC_c02904 
          Length = 619

 Score =  914 bits (461), Expect = 0.0
 Identities = 461/461 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggagttcataggcagaatagttgataaggagttcaaggggtatggtgtttactccgga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 159 atggagttcataggcagaatagttgataaggagttcaaggggtatggtgtttactccgga 218

                                                                       
Query: 61  gttgtgcaatcctacgacccatcgtctggcttctttgagatcgtttacgaagacggcgat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 gttgtgcaatcctacgacccatcgtctggcttctttgagatcgtttacgaagacggcgat 278

                                                                       
Query: 121 tccgaggagcttgatttctcggaagtcgtttccttgttggagcggaaagaagctgtgcca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 tccgaggagcttgatttctcggaagtcgtttccttgttggagcggaaagaagctgtgcca 338

                                                                       
Query: 181 gttgatcacaagcatcgactcggtcgtaggcctaagaagcgacgtcgactcgagccaagg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 gttgatcacaagcatcgactcggtcgtaggcctaagaagcgacgtcgactcgagccaagg 398

                                                                       
Query: 241 aagcgtgaaaatcaaggacagtcaggtaattctatttctcgtagtcaaccaattgaagaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 aagcgtgaaaatcaaggacagtcaggtaattctatttctcgtagtcaaccaattgaagaa 458

                                                                       
Query: 301 accctagggagaccaagtgttgtagaggctaatgtaaactttgatatgaatcggaatgtt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 accctagggagaccaagtgttgtagaggctaatgtaaactttgatatgaatcggaatgtt 518

                                                                       
Query: 361 gatttgaatgatggatttactggggatttgggagaaggtgaaattgctaatgggaatttg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 gatttgaatgatggatttactggggatttgggagaaggtgaaattgctaatgggaatttg 578

                                                    
Query: 421 agaaatatgaatgttgatttgaatgaagctctagagaaggg 461
           |||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 agaaatatgaatgttgatttgaatgaagctctagagaaggg 619