Jatropha Genome Database

JcCB0095931.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0095931.10 + phase: 0 /partial
         (462 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c03444                                                            440   e-123

>KJC_c03444 
          Length = 647

 Score =  440 bits (222), Expect = e-123
 Identities = 235/238 (98%), Gaps = 1/238 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   aagaatatcgaggattctataccaaaagcaatcatgcatttttgggtgaatcatacaaag 60
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 237 aagaatatcgaggattctataccaaaagcaatcatgcattttttggtgaatcatacaaag 178

                                                                       
Query: 61  cgtgaactgcacaatgtctttattaaaaagctctacagagagaacctgtttgaggagatg 120
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 177 cgtgaactgcacaatgtctttattaaaaaactctacagagagaacctgtttgaggagatg 118

                                                                       
Query: 121 ttgcaggaacctgatgagatagccacaaaaagaaaacacactcgagataaacttcgagtt 180
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 117 ttgcaggaacctgatgagatagccacaaaaag-aaacacactcgagataaacttcgagtt 59

                                                                     
Query: 181 cttcaacaggcttttaggacattggatgaattgccattggaagctgaaacggttgaaa 238
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 58  cttcaacaggcttttaggacattggatgaattgccattggaagctgaaacggttgaaa 1