Jatropha Genome Database
- JcCB0095251.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0095251.10 - phase: 2 /partial
(2005 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c00774 1451 0.0
KJC_c01799 1146 0.0
>KJC_c00774
Length = 1318
Score = 1451 bits (732), Expect = 0.0
Identities = 739/740 (99%), Gaps = 1/740 (0%)
Strand = Plus / Plus
Query: 1 cacctggaacttgaaaatgaaaaagagcgcaacttgcagaatggctaatctcattggatt 60
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 397 cacctggaacttgaaaatgaaaaagagcgcaacttg-agaatggctaatctcattggatt 455
Query: 61 caatctagaccctaaacctgagagtagagaagcgctttcaaggccatcccttctgtcaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 caatctagaccctaaacctgagagtagagaagcgctttcaaggccatcccttctgtcaga 515
Query: 121 actgatttccaagggggtattgagctgtgctacacaggaagtgaaagatctttatcatct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 actgatttccaagggggtattgagctgtgctacacaggaagtgaaagatctttatcatct 575
Query: 181 tctggagaatgagtttctccccctagatcttgcagcaaaggtacagccactgttatccaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 tctggagaatgagtttctccccctagatcttgcagcaaaggtacagccactgttatccaa 635
Query: 241 gatctcaaaacttgggggaaaaattgcttcagcttcttctgtgccagaagtgcaactgtc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 gatctcaaaacttgggggaaaaattgcttcagcttcttctgtgccagaagtgcaactgtc 695
Query: 301 tcaatatgttcctgcccttgaaaagcttgctactttaaggctgcttcagcaggtgtcaca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 696 tcaatatgttcctgcccttgaaaagcttgctactttaaggctgcttcagcaggtgtcaca 755
Query: 361 ggtgtatcagatgatgaaaattgagagtttatctcagatgatcccctttcttgacttttc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 756 ggtgtatcagatgatgaaaattgagagtttatctcagatgatcccctttcttgacttttc 815
Query: 421 tgttgtcgagaaaatttctgttgatgctgtgaaacataatttcttagctatgaaagttga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 816 tgttgtcgagaaaatttctgttgatgctgtgaaacataatttcttagctatgaaagttga 875
Query: 481 acatacaaagggcgtcatattgtttaataatttgggtcttgaatctgatggactgcgaga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 876 acatacaaagggcgtcatattgtttaataatttgggtcttgaatctgatggactgcgaga 935
Query: 541 ccatcttgcaatttttgcggaatccttaaataaagtgagggccttgatatatcctccagc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 936 ccatcttgcaatttttgcggaatccttaaataaagtgagggccttgatatatcctccagc 995
Query: 601 aaagaaatcttcaaaactaggtgagattttacctggattgggggagattgtggataagga 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 996 aaagaaatcttcaaaactaggtgagattttacctggattgggggagattgtggataagga 1055
Query: 661 acataaaagactgcttgctcggaaatcaattattgaaaagaggaaggaagaacaagaacg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1056 acataaaagactgcttgctcggaaatcaattattgaaaagaggaaggaagaacaagaacg 1115
Query: 721 tcaacttttggaaatggaac 740
||||||||||||||||||||
Sbjct: 1116 tcaacttttggaaatggaac 1135
Score = 230 bits (116), Expect = 1e-59
Identities = 116/116 (100%)
Strand = Plus / Plus
Query: 805 tgcagctgagattgagcaacgaaagaaccaaaggatcctccaggaaatagagcagcgaga 864
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1200 tgcagctgagattgagcaacgaaagaaccaaaggatcctccaggaaatagagcagcgaga 1259
Query: 865 acttgaagaagcacaggctttgcttgaggatgttgacaagcgaagtaaaaggaagg 920
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1260 acttgaagaagcacaggctttgcttgaggatgttgacaagcgaagtaaaaggaagg 1315
>KJC_c01799
Length = 1076
Score = 1146 bits (578), Expect = 0.0
Identities = 592/594 (99%), Gaps = 2/594 (0%)
Strand = Plus / Minus
Query: 1007 caggaaat-ggagaagaaattacaaaaacta-gctaaaacgatggattatttggaaagag 1064
|||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1076 caggaaataggagaagaaattacaaaaactaagctaaaacgatggattatttggaaagag 1017
Query: 1065 caaagagagaggaggcagcaccattgattgaggctgctttccaacgacgcctggtggaag 1124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1016 caaagagagaggaggcagcaccattgattgaggctgctttccaacgacgcctggtggaag 957
Query: 1125 agaaggctcttaatgaacatgagcagcagctagagattgaacttagcaggcagcgccatg 1184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 956 agaaggctcttaatgaacatgagcagcagctagagattgaacttagcaggcagcgccatg 897
Query: 1185 acggtgacctcagggagaagaataggttgtctcggatgctggaaaacaaaatgatattcc 1244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 896 acggtgacctcagggagaagaataggttgtctcggatgctggaaaacaaaatgatattcc 837
Query: 1245 aggaaagagtaatgagccgccgacaagctgagtttgaccggctgagaacagagagagaag 1304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 836 aggaaagagtaatgagccgccgacaagctgagtttgaccggctgagaacagagagagaag 777
Query: 1305 aaagaatcaatcaaattattcaggcccgaaaacaagaaagggaagctaataggaagaaaa 1364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 776 aaagaatcaatcaaattattcaggcccgaaaacaagaaagggaagctaataggaagaaaa 717
Query: 1365 tattctatgtgaggactgaagaggaaaggctgaggaagttgcgtgaagaggaggaagctc 1424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 716 tattctatgtgaggactgaagaggaaaggctgaggaagttgcgtgaagaggaggaagctc 657
Query: 1425 gcaagcgagaagaggctgagagacgacggaaagaagaagctgaacgcaaggcaaagctgg 1484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 656 gcaagcgagaagaggctgagagacgacggaaagaagaagctgaacgcaaggcaaagctgg 597
Query: 1485 atgagattgctgcaaagcagagacagagagaactagaacttgaagaaaagaaggaaaggc 1544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 atgagattgctgcaaagcagagacagagagaactagaacttgaagaaaagaaggaaaggc 537
Query: 1545 aaaggcgggaagctctcttgggaagatcaactgatgggcctactagaccttctg 1598
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 aaaggcgggaagctctcttgggaagatcaactgatgggcctactagaccttctg 483
Score = 609 bits (307), Expect = e-173
Identities = 307/307 (100%)
Strand = Plus / Minus
Query: 1699 aacccctgggaagtatgtgcctaggttccgaagggatagagaaagcactggccaggctcc 1758
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 aacccctgggaagtatgtgcctaggttccgaagggatagagaaagcactggccaggctcc 323
Query: 1759 tccagattctgagaagtggggtggtggcagcagcaggcaggctccttctgagccggaacg 1818
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 tccagattctgagaagtggggtggtggcagcagcaggcaggctccttctgagccggaacg 263
Query: 1819 gtggagtggtggcgtaaggcagccaccttcagattcagaacggtggggcagcggtagctc 1878
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 gtggagtggtggcgtaaggcagccaccttcagattcagaacggtggggcagcggtagctc 203
Query: 1879 caggcaagctcctccctcagactctgatcgatggggcagtggtccaagacctgaggatcg 1938
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 caggcaagctcctccctcagactctgatcgatggggcagtggtccaagacctgaggatcg 143
Query: 1939 caacccacctggtgataggtggcgcggcagcagttcaaagacctcttggtcatcatctag 1998
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142 caacccacctggtgataggtggcgcggcagcagttcaaagacctcttggtcatcatctag 83
Query: 1999 acgcgga 2005
|||||||
Sbjct: 82 acgcgga 76