Jatropha Genome Database
- JcCB0094931.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0094931.10 - phase: 0
(423 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c06118 458 e-129
KJC_c06689 200 2e-51
>KJC_c06118
Length = 538
Score = 458 bits (231), Expect = e-129
Identities = 238/239 (99%), Gaps = 1/239 (0%)
Strand = Plus / Minus
Query: 54 tggcgatatgtttactgaagaacagaatgagctggtggaatctgcagcagagatgctgta 113
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 tggcgatatgtttactgaagaacagaatgagctggtggaatctgcagcagagatgctgta 439
Query: 114 tggtttaatccatgtgcgatatatactgactaccaagggaatggctgcgatgttagagaa 173
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 tggtttaatccatgtgcgatatatactgactaccaagggaatggctgcgatgttagagaa 379
Query: 174 gtacaaaaattatgactttgggagatgcccaagagtttactgctgtggacagccctgcct 233
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 gtac-aaaattatgactttgggagatgcccaagagtttactgctgtggacagccctgcct 320
Query: 234 tccggttggtcaatcagacattcctcgttcaagcactgttaaaatctactgtccaaagt 292
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 tccggttggtcaatcagacattcctcgttcaagcactgttaaaatctactgtccaaagt 261
Score = 244 bits (123), Expect = 1e-64
Identities = 130/131 (99%), Gaps = 1/131 (0%)
Strand = Plus / Minus
Query: 293 acattgatggagcttattttggaacgacgtttcctcacctatttctgatgacgtatgggc 352
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 221 acattgatggagcttattttggaacgacgtttcctcacctatttctgatgacgtatgggc 162
Query: 353 acctgaagccacaaaaggcagcacagagctacgtacctagagtttttggcttcaagctcc 412
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 161 acctgaagccac-aaaggcagcacagagctacgtacctagagtttttggcttcaagctcc 103
Query: 413 acaaaccttga 423
|||||||||||
Sbjct: 102 acaaaccttga 92
>KJC_c06689
Length = 435
Score = 200 bits (101), Expect = 2e-51
Identities = 191/221 (86%)
Strand = Plus / Minus
Query: 58 gatatgtttactgaagaacagaatgagctggtggaatctgcagcagagatgctgtatggt 117
||||||||||| || ||||| | ||| | || ||||| |||||||||||||| ||||||
Sbjct: 229 gatatgtttacagaggaacaacacgagttagttgaatcagcagcagagatgctttatggt 170
Query: 118 ttaatccatgtgcgatatatactgactaccaagggaatggctgcgatgttagagaagtac 177
|| ||||||| ||||||||| |||| |||| ||||||||||| ||| | || ||||||
Sbjct: 169 ttgatccatgcccgatatatattgaccgccaaaggaatggctgctatgctggacaagtac 110
Query: 178 aaaaattatgactttgggagatgcccaagagtttactgctgtggacagccctgccttccg 237
|| || | ||||||||||||||||||||| ||||||||||||||||| ||||| |||||
Sbjct: 109 aagaactgtgactttgggagatgcccaagggtttactgctgtggacaaccctgtcttcca 50
Query: 238 gttggtcaatcagacattcctcgttcaagcactgttaaaat 278
||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 49 gttggtcaatcagacattcctcggtcaagcactgtaaaaat 9