Jatropha Genome Database
- JcCB0087171.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0087171.10 - phase: 0 /partial
(1350 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c00520 2064 0.0
KJC_c03803 1413 0.0
KJC_c01852 789 0.0
KJC_s13905 664 0.0
KJC_s15782 319 1e-86
KJC_c01287 127 8e-29
KJC_c00942 80 2e-14
>KJC_c00520
Length = 1330
Score = 2064 bits (1041), Expect = 0.0
Identities = 1061/1068 (99%)
Strand = Plus / Minus
Query: 1 atggaggggcagaaaggtcattctagacgtcaggcatcggcaagagacgctgaaactgcg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1154 atggaggggcagaaaggtcattctagacgtcaggcatcggcaagagacgctgaaactgcg 1095
Query: 61 ttgtatactgagctgtggcatgcctgtgccggtcccttggtaaccgttcctcgtgaaggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1094 ttgtatactgagctgtggcatgcctgtgccggtcccttggtaaccgttcctcgtgaaggt 1035
Query: 121 gagcgcgtgttctactttcctcagggacacatcgaacaggttgaggcgtcaacaaatcaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1034 gagcgcgtgttctactttcctcagggacacatcgaacaggttgaggcgtcaacaaatcaa 975
Query: 181 gtggccgaccagcagatgccggtatattgtcttccatcaaagatcttatgtcgcgttatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 974 gtggccgaccagcagatgccggtatattgtcttccatcaaagatcttatgtcgcgttatc 915
Query: 241 aacgtcctgttgaaggccgaaccagatacggacgaggtgtatgcccaagtgacactggtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 914 aacgtcctgttgaaggccgaaccagatacggacgaggtgtatgcccaagtgacactggtt 855
Query: 301 cctgaggccatacaagatgagaatgctgttgagaagcagccttcccaacctcctccaccc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 854 cctgaggccatacaagatgagaatgctgttgagaagcagccttcccaacctcctccaccc 795
Query: 361 cgatttcatgtgcattcattttgtaaaactttgactgcatcagacacaagcactcatggt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 794 cgatttcatgtgcattcattttgtaaaactttgactgcatcagacacaagcactcatggt 735
Query: 421 gggttttctgtgcttaggcgacatgctgttgaatgtctgccacctctggatatgtcaagg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 734 gggttttctgtgcttaggcgacatgctgttgaatgtctgccacctctggatatgtcaagg 675
Query: 481 cagccaccaactcaggaattggttgcgaaggatttgcatggaaatgaatggcgtttccag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 cagccaccaactcaggaattggttgcgaaggatttgcatggaaatgaatggcgtttccag 615
Query: 541 cacatttttcgagggcaaccgcgaaggcacttgcttcaaagtggatggagtgtgttcgtt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 cacatttttcgagggcaaccgcgaaggcacttgcttcaaagtggatggagtgtgttcgtt 555
Query: 601 agctccaaaaggcttgttgctggagatgcctttatatttttaagaggtgagaatggagaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 agctccaaaaggcttgttgctggagatgcctttatatttttaagaggtgagaatggagaa 495
Query: 661 cttagagttggtgtcagaagggcaatgagacagcagggaaatgttccatcttctgtaata 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 cttagagttggtgtcagaagggcaatgagacagcagggaaatgttccatcttctgtaata 435
Query: 721 tccagtcacagcatgcatctagatgtgcttgctacagcatcgcgtgctgtctctanagga 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 434 tccagtcacagcatgcatctagatgtgcttgctacagcatcgcgtgctgtctctagagga 375
Query: 781 accatgttcaccgtttattataagccaaggacaagcccgtctgagtttattgttccattt 840
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
Sbjct: 374 accatgttcaccgtttattataagccaaggacaagcccatctgagtttattgttccatat 315
Query: 841 gatcggtatatggagtctgtcaagaacaattattctattggaatgaggtttaaaatgaga 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 gatcggtatatggagtctgtcaagaacaattattctattggaatgaggtttaaaatgaga 255
Query: 901 tttgaaggagaagaagctcctgagcaaagatttactggcacaattgttggaattgaagat 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 tttgaaggagaagaagctcctgagcaaagatttactggcacaattgttggaattgaagat 195
Query: 961 gctgattccacaaggtggccagaatctaaatggagatgccttaaggtgaggtgggatgaa 1020
||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 194 gctgattcccaaaggtggccagaatctaaatggagatgccttgaggtgaggtgggatgaa 135
Query: 1021 acttctgctatacctcgtccagatagagtttcaccatggagtatagag 1068
|||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 134 acttctgctatacctcttccagatagagtttcaccatggagtatagag 87
>KJC_c03803
Length = 1128
Score = 1413 bits (713), Expect = 0.0
Identities = 830/864 (96%), Gaps = 4/864 (0%)
Strand = Plus / Minus
Query: 2 tggaggggcagaaaggtcattctagacgtcaggcatcggcaagagacgctgaaactgcgt 61
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 861 tggaggggcagaaaggtcattgtagacgtcaggcatcggcaagagacgctgaaactgcgt 802
Query: 62 tgtatactgagctgtggcatgcctgtgccggtcccttggtaaccgttcctcgtgaaggtg 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 tgtatactgagctgtggcatgcctgtgccggtcccttggtaaccgttcctcgtgaaggtg 742
Query: 122 agcgcgtgttctactttcctcagggacacatcgaacaggttgaggcgtcaacaaatcaag 181
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
Sbjct: 741 agcgcgtgttctactttcctcagggacatatcgaacaggttgaggcgtcaacaaatcagg 682
Query: 182 tggccgaccagcagatgccggtatattgtcttccatcaaagatcttatgtcgcgttatca 241
||||||||| ||||||||| |||||| |||||||||||||||||||||| |||||||||
Sbjct: 681 tggccgaccggcagatgccagtatatgatcttccatcaaagatcttatgtagcgttatca 622
Query: 242 acgtcctgttgaaggccgaaccagatacggacgaggtgtatgcccaagtgacactggttc 301
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 acgtcctcttgaaggccgaaccagatacggacgaggtgtatgcccaagtgacactggttc 562
Query: 302 ctgaggccatacaagatgagaatgctgttgagaagcagccttcccaacctcctccacccc 361
||||||||| ||||||||||||||||||||||||| || || || | || ||||||||||
Sbjct: 561 ctgaggccaaacaagatgagaatgctgttgagaaggagtctcccaagccacctccacccc 502
Query: 362 gatttcatgtgcattcattttgtaaaactttgactgcatcagacacaagcactcatggtg 421
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 501 gatttcatgtgcattcattttgtaaaactttgactgcatcagatacaagcactcatggtg 442
Query: 422 ggttttctgtgcttaggcgacatgctgttgaatgtctgccacctctggatatgtcaaggc 481
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 441 ggttttctgtgcttaggcgacatgctgatgaatgtctgccacctctggatatgtcaaggc 382
Query: 482 agccaccaac-tcaggaattggttgcgaaggatttgcatggaaatgaatggcgtttccag 540
|||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 381 agcccccaacgtcaggaattggttgcgaaggatttgcatggaaatgaatggcgtttccgg 322
Query: 541 cacatttttcgagggcaaccgcgaaggcacttgcttcaaagtggatggagtgtgttcgtt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cacatttttcgagggcaaccgcgaaggcacttgcttcaaagtggatggagtgtgttcgtt 262
Query: 601 agctccaaaaggcttgttgctggagatgcctttatatttttaagaggtgagaatggagaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agctccaaaaggcttgttgctggagatgcctttatatttttaagaggtgagaatggagaa 202
Query: 661 cttagagttggtgtcagaagggcaatgagacagcagggaaatgttccatcttctgtaata 720
|||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||
Sbjct: 201 cttagagttggtgtcagacgggcaatgagacagcagggaaatgctccatcttctgtaata 142
Query: 721 tccagtcacagcatgcatctagatgtgcttgctacagcatcgcgtgctgtctctanagga 780
|||||||||||||||||||||| |||||||||||||||| || ||||||||||| ||||
Sbjct: 141 tccagtcacagcatgcatctaggagtgcttgctacagcatggcatgctgtctctacagga 82
Query: 781 accatgttcaccgtttattataagccaaggacaagcccgtctgagtttattgttccattt 840
||||||||||||||||| |||||||||||||||||||| |||||||||| |||||||| |
Sbjct: 81 accatgttcaccgttta-tataagccaaggacaagcccatctgagttta-tgttccatat 24
Query: 841 gatcggtatatggagtctgtcaag 864
||||| ||||| ||||||||||||
Sbjct: 23 gatcgttatat-gagtctgtcaag 1
>KJC_c01852
Length = 484
Score = 789 bits (398), Expect = 0.0
Identities = 405/406 (99%), Gaps = 1/406 (0%)
Strand = Plus / Minus
Query: 946 gttggaattgaagat-gctgattccacaaggtggccagaatctaaatggagatgccttaa 1004
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 gttggaattgaagatagctgattccacaaggtggccagaatctaaatggagatgccttaa 418
Query: 1005 ggtgaggtgggatgaaacttctgctatacctcgtccagatagagtttcaccatggagtat 1064
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 ggtgaggtgggatgaaacttctgctatacctcgtccagatagagtttcaccatggagtat 358
Query: 1065 agagcctgctctggctcctccggcactgaatcctcttccagtgcccagacctaaaagacc 1124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 agagcctgctctggctcctccggcactgaatcctcttccagtgcccagacctaaaagacc 298
Query: 1125 tcgatccagcatggttccttcatctccagactcctctgttcttgctagagaaggttcatc 1184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 tcgatccagcatggttccttcatctccagactcctctgttcttgctagagaaggttcatc 238
Query: 1185 caaagtaactgcagaccctacactgccgattggatattcaagggtcttgcaaggtcaaga 1244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 237 caaagtaactgcagaccctacactgccgattggatattcaagggtcttgcaaggtcaaga 178
Query: 1245 attcgcgaccttgagaagcagtgttgtggagagcaacgaatctgacactgctgaaaagtc 1304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 177 attcgcgaccttgagaagcagtgttgtggagagcaacgaatctgacactgctgaaaagtc 118
Query: 1305 agttatgtggccgtcttctatagatgatgagaagattgatgtggta 1350
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117 agttatgtggccgtcttctatagatgatgagaagattgatgtggta 72
>KJC_s13905
Length = 514
Score = 664 bits (335), Expect = 0.0
Identities = 386/403 (95%)
Strand = Plus / Minus
Query: 2 tggaggggcagaaaggtcattctagacgtcaggcatcggcaagagacgctgaaactgcgt 61
||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||
Sbjct: 410 tggaggggcagaaaggtcattgtaggcgtcaggcatcggcaagagacgctgaaactgcgt 351
Query: 62 tgtatactgagctgtggcatgcctgtgccggtcccttggtaaccgttcctcgtgaaggtg 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 tgtatactgagctgtggcatgcctgtgccggtcccttggtaaccgttcctcgtgaaggtg 291
Query: 122 agcgcgtgttctactttcctcagggacacatcgaacaggttgaggcgtcaacaaatcaag 181
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
Sbjct: 290 agcgcgtgttctactttcctcagggacatatcgaacaggttgaggcgtcaacaaatcagg 231
Query: 182 tggccgaccagcagatgccggtatattgtcttccatcaaagatcttatgtcgcgttatca 241
||||||||| ||||||||| |||||| |||||||||||||||||||||| |||||||||
Sbjct: 230 tggccgaccggcagatgccagtatatgatcttccatcaaagatcttatgtagcgttatca 171
Query: 242 acgtcctgttgaaggccgaaccagatacggacgaggtgtatgcccaagtgacactggttc 301
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 170 acgtcctcttgaaggccgaaccagatacggacgaggtgtatgcccaagtgacactggttc 111
Query: 302 ctgaggccatacaagatgagaatgctgttgagaagcagccttcccaacctcctccacccc 361
||||||||| ||||||||||||||||||||||||| || || || | || ||||||||||
Sbjct: 110 ctgaggccaaacaagatgagaatgctgttgagaaggagtctcccaagccacctccacccc 51
Query: 362 gatttcatgtgcattcattttgtaaaactttgactgcatcaga 404
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 50 gatttcatgtgcattcattttgtaaaactttgactgcatcaga 8
>KJC_s15782
Length = 307
Score = 319 bits (161), Expect = 1e-86
Identities = 202/213 (94%), Gaps = 2/213 (0%)
Strand = Plus / Plus
Query: 271 gacgaggtgtatgcccaagtgacactggttcctgaggccatacaagatgagaatgctgtt 330
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 85 gacgaggtgtatgcccaagtgacactggttcctgaggccaaacaagatgagaatgctgtt 144
Query: 331 gagaagcagccttcccaacctcctccaccccgatttcatgtgcattcattttgtaaaact 390
|||||| || || || | || ||||||||||||||||||||||||||||||||| |||||
Sbjct: 145 gagaaggagtctcccaagccacctccaccccgatttcatgtgcattcattttgt-aaact 203
Query: 391 ttgactgcatcagacacaagcactcatgg-tgggttttctgtgcttaggcgacatgctgt 449
|||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 204 ttgactgcatcagatacaagcactcatggttgggttttctgtgcttaggcgacatgctga 263
Query: 450 tgaatgtctgccacctctggatatgtcaaggca 482
|||||||||||||||||||||||||||||||||
Sbjct: 264 tgaatgtctgccacctctggatatgtcaaggca 296
Score = 119 bits (60), Expect = 2e-26
Identities = 81/88 (92%)
Strand = Plus / Minus
Query: 167 cgtcaacaaatcaagtggccgaccagcagatgccggtatattgtcttccatcaaagatct 226
||||||||||||| |||||||||| ||||||||| |||||| |||||||||||||||||
Sbjct: 88 cgtcaacaaatcaggtggccgaccggcagatgccagtatatgatcttccatcaaagatct 29
Query: 227 tatgtcgcgttatcaacgtcctgttgaa 254
||||| |||||||||||||||| |||||
Sbjct: 28 tatgtagcgttatcaacgtcctcttgaa 1
>KJC_c01287
Length = 1213
Score = 127 bits (64), Expect = 8e-29
Identities = 84/88 (95%), Gaps = 2/88 (2%)
Strand = Plus / Plus
Query: 1262 gcagtgttgtggagagcaacgaatctgacactgct-gaaaagt-cagttatgtggccgtc 1319
|||||||||||||||| ||||||||||||||||| ||||||| ||||||||||||||||
Sbjct: 1 gcagtgttgtggagagacacgaatctgacactgctcgaaaagtacagttatgtggccgtc 60
Query: 1320 ttctatagatgatgagaagattgatgtg 1347
||||||||||||||||||||||||||||
Sbjct: 61 ttctatagatgatgagaagattgatgtg 88
>KJC_c00942
Length = 1888
Score = 79.8 bits (40), Expect = 2e-14
Identities = 151/188 (80%)
Strand = Plus / Minus
Query: 373 cattcattttgtaaaactttgactgcatcagacacaagcactcatggtgggttttctgtg 432
|||||||||||||| || | ||||| || |||||||||||||||||||| || |||||
Sbjct: 1474 cattcattttgtaagacgcttactgcttctgacacaagcactcatggtggtttctctgtt 1415
Query: 433 cttaggcgacatgctgttgaatgtctgccacctctggatatgtcaaggcagccaccaact 492
|| | | ||||| | ||| |||||||| |||||||||||||| ||||||||
Sbjct: 1414 ctacgaaggcatgcagatgattgtctgcctcctctggatatgtcccaacagccaccttgg 1355
Query: 493 caggaattggttgcgaaggatttgcatggaaatgaatggcgtttccagcacatttttcga 552
|||||| ||||||| ||||||||||| |||||||||| ||||| |||||||||||
Sbjct: 1354 caggaactggttgcttctgatttgcatggcaatgaatggcatttccgacacatttttcgg 1295
Query: 553 gggcaacc 560
|| |||||
Sbjct: 1294 ggtcaacc 1287