Jatropha Genome Database
- JcCB0085561.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0085561.10 + phase: 1 /pseudo/partial
(948 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c00344 1548 0.0
>KJC_c00344
Length = 1503
Score = 1548 bits (781), Expect = 0.0
Identities = 781/781 (100%)
Strand = Plus / Minus
Query: 74 atttcgaccccgcattcttattgatgtgagcaagattgacatgaccacaagtgtcttggg 133
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1241 atttcgaccccgcattcttattgatgtgagcaagattgacatgaccacaagtgtcttggg 1182
Query: 134 cttcaaaatttccatgcctatcatgattgctccaacagccatgcaaaaaatggctcaccc 193
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1181 cttcaaaatttccatgcctatcatgattgctccaacagccatgcaaaaaatggctcaccc 1122
Query: 194 tgaaggagagtatgccacagcaagggcagcttcagcagctggcacaattatgacattatc 253
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1121 tgaaggagagtatgccacagcaagggcagcttcagcagctggcacaattatgacattatc 1062
Query: 254 ctcatgggctacttccagtgtagaggaggttgcttcaactgggcctggcattcgcttttt 313
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1061 ctcatgggctacttccagtgtagaggaggttgcttcaactgggcctggcattcgcttttt 1002
Query: 314 ccagctctatgtctacaaagacaggaatgttgtagctcagcttgtgagaagggctgagag 373
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1001 ccagctctatgtctacaaagacaggaatgttgtagctcagcttgtgagaagggctgagag 942
Query: 374 ggctggtttcaaggctatcgccctcactgtggacactccaagacttggccggagagaagc 433
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 941 ggctggtttcaaggctatcgccctcactgtggacactccaagacttggccggagagaagc 882
Query: 434 tgatatcaagaacagatttaccttgccaccatttttgactttgaagaattttgagggctt 493
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 881 tgatatcaagaacagatttaccttgccaccatttttgactttgaagaattttgagggctt 822
Query: 494 gaatcttggccaaatggacaaggctgatgattctggactagcttcatatgttgctggcca 553
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 821 gaatcttggccaaatggacaaggctgatgattctggactagcttcatatgttgctggcca 762
Query: 554 aattgaccggacacttagctggaaggatgtgaagtggcttcagacaatcacatcattgcc 613
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 761 aattgaccggacacttagctggaaggatgtgaagtggcttcagacaatcacatcattgcc 702
Query: 614 aatcctggttaagggtgtccttactgctgaggatgcaagactagccatacagaatggagc 673
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 701 aatcctggttaagggtgtccttactgctgaggatgcaagactagccatacagaatggagc 642
Query: 674 tgcaggaatcatcgtctccaatcacggagctcgccagcttgattatgttcctgcaactat 733
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 641 tgcaggaatcatcgtctccaatcacggagctcgccagcttgattatgttcctgcaactat 582
Query: 734 tatggctttggaagaggttgtgaaagctgcacaaggcagagttcctgttttccttgatgg 793
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 tatggctttggaagaggttgtgaaagctgcacaaggcagagttcctgttttccttgatgg 522
Query: 794 tggagttcgccgcggaacagatgttttcaaggcattggcactaggagcatctggaatatt 853
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 tggagttcgccgcggaacagatgttttcaaggcattggcactaggagcatctggaatatt 462
Query: 854 t 854
|
Sbjct: 461 t 461