Jatropha Genome Database

JcCB0085161.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0085161.10 - phase: 0 /partial
         (289 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c05666                                                            513   e-146

>KJC_c05666 
          Length = 430

 Score =  513 bits (259), Expect = e-146
 Identities = 259/259 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgggagacaagagctccaccatagccacagccacagacgacgatttgcttctgaagagc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 atgggagacaagagctccaccatagccacagccacagacgacgatttgcttctgaagagc 192

                                                                       
Query: 61  ttcttcgcggaagttagcgaagtcgagagagataacgaagtcctcaggatccttgcatgc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 ttcttcgcggaagttagcgaagtcgagagagataacgaagtcctcaggatccttgcatgc 252

                                                                       
Query: 121 ttcaagttaaatccatttgagcatctaaatcttccatttgattcctctccagaggacgtg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 ttcaagttaaatccatttgagcatctaaatcttccatttgattcctctccagaggacgtg 312

                                                                       
Query: 181 aagaagcagtatcgtaagttatctttgctggttcaccctgacaagtgcaagcatccacaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 aagaagcagtatcgtaagttatctttgctggttcaccctgacaagtgcaagcatccacaa 372

                              
Query: 241 gcaaaagaggcctttgctg 259
           |||||||||||||||||||
Sbjct: 373 gcaaaagaggcctttgctg 391