Jatropha Genome Database
- JcCB0083701.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0083701.10 + phase: 2 /partial
(544 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c00375 1063 0.0
KJC_c01102 204 2e-52
>KJC_c00375
Length = 875
Score = 1063 bits (536), Expect = 0.0
Identities = 543/544 (99%), Gaps = 1/544 (0%)
Strand = Plus / Minus
Query: 1 gacaaggatgctgaaccaactgaatttgaggagtcagttgctcaggcccctgtttgatct 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 771 gacaaggatgctgaaccaactgaatttgaggagtcagttgctcaggccc-tgtttgatct 713
Query: 61 cgaaaataccaacccagaactgaaaagtgatttaaaagatctcttcataaatcaggcagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712 cgaaaataccaacccagaactgaaaagtgatttaaaagatctcttcataaatcaggcagt 653
Query: 121 tcaaatggatgtttctggaaatcggaaagctgttgttatttatgttccctacagattgag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652 tcaaatggatgtttctggaaatcggaaagctgttgttatttatgttccctacagattgag 593
Query: 181 gaaggcctaccgcaagattcatcttcgtcttgttagagagttggagaaaaagttcagcgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 gaaggcctaccgcaagattcatcttcgtcttgttagagagttggagaaaaagttcagcgg 533
Query: 241 aaaggacgttgtcctcattgccacccggaggatcgtgcgcccaccgaagaagggttctgc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 aaaggacgttgtcctcattgccacccggaggatcgtgcgcccaccgaagaagggttctgc 473
Query: 301 tgttcagcgccctcgttcccgaacccttacatctgtgcatgatgccatgcttgaggatgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 tgttcagcgccctcgttcccgaacccttacatctgtgcatgatgccatgcttgaggatgt 413
Query: 361 agtgtatcccgctgagattgttggaaaacgcatcagatacagaatcgatgggtccaaaat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 agtgtatcccgctgagattgttggaaaacgcatcagatacagaatcgatgggtccaaaat 353
Query: 421 tatcaagattttcttggatcccaaagagcgcaacaacactgagtacaagttggagacatt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 tatcaagattttcttggatcccaaagagcgcaacaacactgagtacaagttggagacatt 293
Query: 481 tgctggagtttacaggaagcttactgggaaagatgtggtttttgagtatcctataacaga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 tgctggagtttacaggaagcttactgggaaagatgtggtttttgagtatcctataacaga 233
Query: 541 ggct 544
||||
Sbjct: 232 ggct 229
>KJC_c01102
Length = 657
Score = 204 bits (103), Expect = 2e-52
Identities = 422/527 (80%), Gaps = 1/527 (0%)
Strand = Plus / Plus
Query: 1 gacaaggatgctgaaccaactgaatttgaggagtcagttgctcaggcccctgtttgatct 60
||||||||||||||||| ||||||||||||||||||||||| |||| | || |||||| |
Sbjct: 102 gacaaggatgctgaacccactgaatttgaggagtcagttgcacagg-ctctctttgattt 160
Query: 61 cgaaaataccaacccagaactgaaaagtgatttaaaagatctcttcataaatcaggcagt 120
||||||||||| || || ||||||||||| | || ||||| | ||| ||| |||||
Sbjct: 161 ggaaaataccaatccggagctgaaaagtgacatgaaggatctttacattaattcagcagt 220
Query: 121 tcaaatggatgtttctggaaatcggaaagctgttgttatttatgttccctacagattgag 180
|||||| |||||| |||| | |||||| ||||||||||| || |||| | |||||||||
Sbjct: 221 tcaaattgatgttgctgggagtcggaaggctgttgttatccatattccattcagattgag 280
Query: 181 gaaggcctaccgcaagattcatcttcgtcttgttagagagttggagaaaaagttcagcgg 240
||| || ||| | ||||||||| || | || || |||| | ||||| |||||||| ||
Sbjct: 281 gaaagcttacagaaagattcatgttagactcgtgcgagaacttgagaagaagttcagtgg 340
Query: 241 aaaggacgttgtcctcattgccacccggaggatcgtgcgcccaccgaagaagggttctgc 300
||||| || |||| ||||||||||||||||| | | || || ||||| ||||| ||
Sbjct: 341 caaggatgtaatcctgattgccacccggaggattttaaggcctccaaagaaaggttcagc 400
Query: 301 tgttcagcgccctcgttcccgaacccttacatctgtgcatgatgccatgcttgaggatgt 360
|||||| | ||||| ||| || || || |||||||||| || ||||| |||||| |
Sbjct: 401 tgttcaaaggcctcgcagccgcacactcactgctgtgcatgaggcaatgctggaggatat 460
Query: 361 agtgtatcccgctgagattgttggaaaacgcatcagatacagaatcgatgggtccaaaat 420
|| | || ||||| |||||||| || ||||||||||| |||| ||||| ||||| ||
Sbjct: 461 tgtattacctgctgaaattgttggcaagcgcatcagatatcgaattgatggatccaagat 520
Query: 421 tatcaagattttcttggatcccaaagagcgcaacaacactgagtacaagttggagacatt 480
|| ||| |||||||||| || || ||||| |||||||| || || ||||||||||| ||
Sbjct: 521 aatgaaggttttcttggacccaaaggagcgaaacaacacggaatataagttggagacctt 580
Query: 481 tgctggagtttacaggaagcttactgggaaagatgtggtttttgagt 527
| ||| |||||||||||||||| | || |||||||| || |||||||
Sbjct: 581 ttctgcagtttacaggaagctttcaggcaaagatgttgtgtttgagt 627