Jatropha Genome Database
- JcCB0082241.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0082241.10 + phase: 0 /pseudo/partial
(729 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c04343 434 e-121
KJC_c05470 194 2e-49
>KJC_c04343
Length = 617
Score = 434 bits (219), Expect = e-121
Identities = 219/219 (100%)
Strand = Plus / Plus
Query: 136 ggactttcactgaaatcacaggagttgacggctctatttctagctgttagactctattgc 195
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 ggactttcactgaaatcacaggagttgacggctctatttctagctgttagactctattgc 458
Query: 196 agttttgtcatggaatatgacatacatacactacttgattcagctacattgcttacaact 255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 agttttgtcatggaatatgacatacatacactacttgattcagctacattgcttacaact 518
Query: 256 ctatgggtgatttatatgattcgcttcaaattgaggtccagttacatggatgacaaagac 315
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 ctatgggtgatttatatgattcgcttcaaattgaggtccagttacatggatgacaaagac 578
Query: 316 aactttgcaatctactatgtggtgataccttgtgccgtg 354
|||||||||||||||||||||||||||||||||||||||
Sbjct: 579 aactttgcaatctactatgtggtgataccttgtgccgtg 617
>KJC_c05470
Length = 955
Score = 194 bits (98), Expect = 2e-49
Identities = 363/449 (80%), Gaps = 3/449 (0%)
Strand = Plus / Plus
Query: 132 tgcaggactttcactgaaatcacaggagttgacggctctatttctagctgttagactcta 191
|||||| || ||||| || || ||||| ||||| ||| | ||| ||||||| || || ||
Sbjct: 292 tgcagggctatcacttaagtcccaggaattgacagctatgtttttagctgtcaggctgta 351
Query: 192 ttgcagttttgtcatggaatatgacatacatacactacttgattcagctacattgcttac 251
||| || ||||| ||||||||||| |||||||| |||||||||| |||||||||| |||
Sbjct: 352 ttgtagctttgtgatggaatatgatatacataccctacttgatttagctacattggctac 411
Query: 252 aactctatgggtgatttatatgattcgcttcaaattgaggtccagttacatggatgacaa 311
|||||| ||||| ||||||||||| || || ||||||| ||| ||||||||||| || ||
Sbjct: 412 aactctgtgggttatttatatgatccgttttaaattgaagtctagttacatggaagataa 471
Query: 312 agacaactttgcaatctactatgtggtgataccttgtgccgtgcta--tctttccttatt 369
||| |||||||| || || ||||||||| | || ||||| | ||| ||| |||||
Sbjct: 472 agataactttgcgatatattatgtggtggtgccctgtgctattctagtccttgttttatt 531
Query: 370 cacccgtcaacacatcatcatatattgaacaggatttgctgggc-tttctgtgtttatct 428
|| || |||||| |||| | || | |||||||||| ||||| ||| ||||| |||||
Sbjct: 532 catccatcaacatctcataacttaatcaacaggattttgtgggcgtttttgtgtatatct 591
Query: 429 ggaagctgtttcagtattgcctcagcttcgggtcatgcagaacacaaagattgttgaacc 488
||||||||| || ||| | |||||| | || || |||||||| |||||||||||||||||
Sbjct: 592 ggaagctgtctctgtactacctcagttgcgagttatgcagaatacaaagattgttgaacc 651
Query: 489 tttcacagcacattatgtatttgcactcggagtagcgagattcttgaattgtgcacattg 548
|| ||||| ||||||||||||||| | || || || || ||||||| ||||| |||||
Sbjct: 652 atttacagcgcattatgtatttgcattgggtgttgcaaggttcttgagctgtgcccattg 711
Query: 549 ggtgctgcaggtgttggatactcgaggac 577
||| || ||||| || |||||||| ||||
Sbjct: 712 ggttctccaggttttagatactcgcggac 740