Jatropha Genome Database

JcCB0080081.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0080081.10 + phase: 0 /partial
         (606 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c09802                                                            291   1e-78

>KJC_c09802 
          Length = 598

 Score =  291 bits (147), Expect = 1e-78
 Identities = 147/147 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   gtaggaattggattacttgtgctccagcagctaagtggtatcaatgggattttgttctat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 147 gtaggaattggattacttgtgctccagcagctaagtggtatcaatgggattttgttctat 88

                                                                       
Query: 61  gccagtaacatttttcgaagtgctgggatctcctcaagtaatgctgctacatttgggctt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 87  gccagtaacatttttcgaagtgctgggatctcctcaagtaatgctgctacatttgggctt 28

                                      
Query: 121 ggtcttattcaggttcttgcaactggg 147
           |||||||||||||||||||||||||||
Sbjct: 27  ggtcttattcaggttcttgcaactggg 1