Jatropha Genome Database
- JcCB0079621.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0079621.10 + phase: 0
(939 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c08848 1120 0.0
KJC_c00834 50 1e-05
>KJC_c08848
Length = 586
Score = 1120 bits (565), Expect = 0.0
Identities = 584/588 (99%), Gaps = 2/588 (0%)
Strand = Plus / Minus
Query: 216 tcacgtcgtcagattgatggatgtcaagcaaggcctgagcaaagaagggaaaacagtact 275
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 tcacgtcgtcagattgatggatgtcaagcaaggcctgagcaaagaagggaaaacagtact 527
Query: 276 gtatctggtttttgagtacatggacactgatctcaagaaatatattagaagtttccgcca 335
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 gtatcnggtttttgagtacatggacactgatctcaagaaatatattagaagtttccgcca 467
Query: 336 aactggagagaatattcctgtgaaatttgtcaagagcttgatgtatcaactgtgcaaggg 395
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 aactggagagaatattcctgtgaaatttgtcaagagcttgatgtatcaactgtgcaaggg 407
Query: 396 agttgctttttgccatgggcatggaatcttgcacagggaccttaagcctcataacctgtt 455
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 406 agttgctttttgccatgggcatggaatcttgcacagggaccttaagactcataacctgtt 347
Query: 456 gatggacagaaaaacaatgatgcttaagattgcagatcttggacttgctcgtgcatttac 515
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 gatggacag-aaaacaatgatgcttaagattgcagatcttggacttgctcgtgcatttac 288
Query: 516 tctccccatcaaaaagtatactcatgagatattgaccttgtggtacagagctcctgaagt 575
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 tctccccatcaaaaagtatactcatgagatattgaccttgtggtacagagctcctgaagt 228
Query: 576 cctcttgggagccacacactactcaactgcagtggatatgtggtccgtcggatgtatatt 635
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227 cctcttgggagccacacactactcaactgcagtggatatgtggtccgtcggatgtatatt 168
Query: 636 tgctgaactggttacaaagcaagcacttttccccggggattccgaattgcagcagcttct 695
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 167 tgctgaactggttacaaagcaagcacttttcccc-gggattccgaattgcagcagcttct 109
Query: 696 gcatatttttaggttgttaggtaccccaaatgagaaggtgtggccaggggtgagcaaact 755
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 108 gcatatttttaggttgttaggtaccccaaatgagaaggtgtggccaggggtgagcaaact 49
Query: 756 ggtcaattggcatgagtatcctcagtggagtcctcagagtctgtcaac 803
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 48 ggtcaattggcatgagtatcctcagtggagtcctcagagtctgtcaac 1
>KJC_c00834
Length = 2931
Score = 50.1 bits (25), Expect = 1e-05
Identities = 55/65 (84%)
Strand = Plus / Minus
Query: 556 tggtacagagctcctgaagtcctcttgggagccacacactactcaactgcagtggatatg 615
|||||||| || |||||| | || |||||||||| ||| || ||||||||| | ||||||
Sbjct: 994 tggtacagggcgcctgaacttcttttgggagccaaacaatattcaactgcaattgatatg 935
Query: 616 tggtc 620
|||||
Sbjct: 934 tggtc 930