Jatropha Genome Database
- JcCB0079131.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0079131.10 - phase: 2 /pseudo
(785 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c00918 1271 0.0
>KJC_c00918
Length = 1137
Score = 1271 bits (641), Expect = 0.0
Identities = 669/673 (99%), Gaps = 4/673 (0%)
Strand = Plus / Minus
Query: 1 atatgagaagtatcatgtccattatggaggtgctgaggaagagagaaaagccaactatac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 942 atatgagaagtatcatgtccattatggaggtgctgaggaagagagaaaagccaactatac 883
Query: 61 tgacatggttaataaatactatgaccttgttactagcttttatgagtttggctgggggga 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 882 tgacatggttaataaatactatgaccttgttactagcttttatgagtttggctggggg-a 824
Query: 121 gtctttccattttgcacacagagttaaaggggagtctcttcgagaaagcatcaagagaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 823 gtctttccattttgcacacagagttaaaggggagtctcttcgagaaagcatcaagagaca 764
Query: 181 tgagcactttcttgctttgcagcttggtctgaaacctggacagaaggtcttggatgtagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 763 tgagcactttcttgctttgcagcttggtctgaaacctggacagaaggtcttggatgtagg 704
Query: 241 atgtggaattggtggaccactgagagaaattgctcgattcagcttgacatctgttacagg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 703 atgtggaattggtggaccactgagagaaattgctcgattcagcttgacatctgttacagg 644
Query: 301 gcttaacaacaatgaatatcagatatcaagagggaaggaactgaatcggattgcaggagt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 643 gcttaacaacaatgaatatcagatatcaagagggaaggaactgaatcggattgcaggagt 584
Query: 361 ggacaagacctgtgattttgtgaaggctgacttcatgaaaatgccatttcccgacagtag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 ggacaagacctgtgattttgtgaaggctgacttcatgaaaatgccatttcccgacagtag 524
Query: 421 ttttgatgcagtttatgcgattgaagctacttgccatgcaccagatgcatatggatgcta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 ttttgatgcagtttatgcgattgaagctacttgccatgcaccagatgcatatggatgcta 464
Query: 481 cagccagatttacagagtattgaagcctggacaacgttttgctgcatatgaatggtgcat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 cagccagatttacagagtattgaagcctggacaacgttttgctgcatatgaatggtgcat 404
Query: 541 gactgattcttttgatcccaataaccaagaacatcagaaaattaa-gcggaaattgagat 599
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 403 gactgattcttttgatcccaataaccaagaacatcagaaaattaaggcggaaattgagat 344
Query: 600 tggtgatggccttccagacattaggtcaactgctcaatgcattgaaagctctc-aaaaag 658
|||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||
Sbjct: 343 tggtgatggccttccagacattaggtcaactgctcaatgcattg-aagctctcaaaaaag 285
Query: 659 ctggttttgaggt 671
|||||||||||||
Sbjct: 284 ctggttttgaggt 272