Jatropha Genome Database
- JcCB0077811.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0077811.10 - phase: 0 /TE
(1104 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c06435 1925 0.0
>KJC_c06435
Length = 1282
Score = 1925 bits (971), Expect = 0.0
Identities = 1005/1011 (99%), Gaps = 4/1011 (0%)
Strand = Plus / Plus
Query: 95 ttcctatacatcaccggtattcggatccaataaaggggattttagcggtcgatgacttgc 154
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttcctatacatcaccggtattcggatccaataaaggggattttagcggtcgatgacttgc 60
Query: 155 cggaaaaaggtagtccccactattatgcttctttgactcaccgggacagattaatccatg 214
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cggaaaaaggtagtccccactattatgcttctttgactcaccgggacagattaatccatg 120
Query: 215 gccgaaaactggccgcttctgataattccacg-cctcttactttcttttctgggaatgaa 273
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 121 gccgaaaactggccgcttctgataattccacgtcctcttactttcttttctgggaatgaa 180
Query: 274 acttatcggatcagttctcttggatttttacattatgcaaatgtttcagttgggacacca 333
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 acttatcggatcagttctcttggatttttacattatgcaaatgtttcagttgggacacca 240
Query: 334 agtttatcatttcttgtagcactagatactggtagtgatcttttctggttaccatgtgat 393
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 agtttatcatttcttgtagcactagatactggtagtgatcttttctggttaccatgtgat 300
Query: 394 tgtaaaagttgtgtccatggcttgcgatcttcatctggagaggagctagagcttagtatt 453
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tgtaaaagttgtgtccatggcttgcgatcttcatctggagaggagctagagcttagtatt 360
Query: 454 tacagtcctaataattcatcaacgagcgaaaatgtcccctgcaacagctccttgtgttca 513
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tacagtcctaataattcatcaacgagcgaaaatgtcccctgcaacagctccttgtgttca 420
Query: 514 gcgcaaagtcgatgcgcctcctctcaaagtacttgtccttatcaggttttatacctttct 573
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gcgcaaagtcgatgcgcctcctctcaaagtacttgtccttatcaggttttatacctttct 480
Query: 574 aatggcacttcatcaactgggtttttggtagaggatgtattacatttaactacagacgat 633
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 aatggcacttcatcaactgggtttttggtagaggatgtattacatttaactacagacgat 540
Query: 634 gctcaatcaaaagctcttgatccaaagattaaatttggttgtggtcaaatacaaactggt 693
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gctcaatcaaaagctcttgatccaaagattaaatttggttgtggtcaaatacaaactggt 600
Query: 694 tcatttttggatggtgcagctcccaatggcttatttgggcttggtatgagtaatatctct 753
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tcatttttggatggtgcagctcccaatggcttatttgggcttggtatgagtaatatctct 660
Query: 754 gttcctagtactttagcaagagaagggtatacttcaaattcattttccatgtgttttgga 813
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 661 gttcctagtactttagcaagagaagggtatacttcaaattcattttccatgtg-tttgga 719
Query: 814 cctgatggaatggggagaatcagttttggagatacagggagctctgaccaaggagaaact 873
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 cctgatggaatggggagaatcagttttggagatacagggagctctgaccaaggagaaact 779
Query: 874 cctttcaacctaaaggagccacacccaacttacaatattagcatcacaaaaataaatgtg 933
|| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 780 cc-ttcaacctaaaggagccacacccaacttacaatattagcatcacaaaaat-aatgtg 837
Query: 934 gatggaaatgatactaatctcgagtttgctgcaattttcgattccggtacctctttcaca 993
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 838 gatggaaatgatactaatctcgagtttgctgcaattttcgattccggtacctctttcaca 897
Query: 994 tacctcaatgatccagcctattcagttatatcagagagcttcaataacaaggcaaaagac 1053
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 898 tacctcaatgatccagcctattcagttatatcagagagcttcaataacaaggcaaaagac 957
Query: 1054 agacgctatacatctggttctggttctggattaccttttgtaatactgtta 1104
||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 958 agacgctatacatctggttctggttctggattacctttttgaatactgtta 1008