Jatropha Genome Database
- JcCB0077571.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0077571.20 - phase: 1 /partial
(941 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c02126 971 0.0
KJC_c12713 163 1e-39
>KJC_c02126
Length = 1315
Score = 971 bits (490), Expect = 0.0
Identities = 493/494 (99%)
Strand = Plus / Minus
Query: 1 aggatatgtttagcaagtgcagtgatccattataccgagtcgagttgcctggacttgacc 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1130 aggatatgtttagcaagtgcagtgatccattataccgagtcgagttgcctggacttgaac 1071
Query: 61 ccctaactagtcgcgaccttccttcatttctagttccttctaacgcttacgcttttgttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1070 ccctaactagtcgcgaccttccttcatttctagttccttctaacgcttacgcttttgttc 1011
Query: 121 tttcgttgtttgcagaacagttagagatgcttaacaaagaaaccaatccaaaaatattgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1010 tttcgttgtttgcagaacagttagagatgcttaacaaagaaaccaatccaaaaatattgg 951
Query: 181 taaacacttttgatgctttagaacacagagccctaaaagtcattgataagttcaacatga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 950 taaacacttttgatgctttagaacacagagccctaaaagtcattgataagttcaacatga 891
Query: 241 ttgggattggaccattacttccatctgccattcttgacgggaatgatccgtcggatacct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 890 ttgggattggaccattacttccatctgccattcttgacgggaatgatccgtcggatacct 831
Query: 301 gttttggcgctgatcttttccaaaactcaaagactagttacaaagaatggctaaactcgc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 830 gttttggcgctgatcttttccaaaactcaaagactagttacaaagaatggctaaactcgc 771
Query: 361 aaccaaaatcatcggttgtttatgtctcatttgggagtatttgtatcttatccaaaaagc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 770 aaccaaaatcatcggttgtttatgtctcatttgggagtatttgtatcttatccaaaaagc 711
Query: 421 aaacagaagaaatcgctcgagggttactgaagagtaatcgaccattcttatgggttataa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 710 aaacagaagaaatcgctcgagggttactgaagagtaatcgaccattcttatgggttataa 651
Query: 481 gggaagacccaaat 494
||||||||||||||
Sbjct: 650 gggaagacccaaat 637
Score = 660 bits (333), Expect = 0.0
Identities = 365/381 (95%)
Strand = Plus / Minus
Query: 561 gtgccttggtgtgatcaagtagaggttttatctaatcaatcgttaggatgtttcatatct 620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 gtgccttggtgtgatcaagtagaggttttatctaatcaatcgttaggatgtttcatatct 508
Query: 621 cattgtggctggaactccacactagagagcttagtttcaggagtcccagtggtggctttt 680
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 cattgtggctggaactccacactagagagcttagtttcaggagtcccagtggtggctttt 448
Query: 681 ccacaatggacagatcaaggaacaaatgcaaagttgattgaagatgattgggagataggg 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 ccacaatggacagatcaaggaacaaatgcaaagttgattgaagatgattgggagataggg 388
Query: 741 gtaagggttgtgccaaatgaagaaggaatagtagaaggtgaggagataacaaggtgttta 800
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 gtaagggttgtgccaaatgaagaaggaatagtagaaggtgaggagataacaaggtgttta 328
Query: 801 gacttggttatgggagatggagagaaaggaaaagatgtaagnnnnnnnnnnnnnnnntgg 860
||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 327 gacttggttatgggagatggagagaaaggaaaagatgtaagaaaaaatgctaaaaaatgg 268
Query: 861 aaggatttggcgagagaagctgtcaaggaaagtgggtcttcggataagaatcttaaggct 920
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 aaggatttggcgagagaagctgtcaaggaaagtgggtcttcggataagaatcttaaggct 208
Query: 921 ttcgttgatgaggttttgtct 941
|||||||||||||||||||||
Sbjct: 207 ttcgttgatgaggttttgtct 187
>KJC_c12713
Length = 103
Score = 163 bits (82), Expect = 1e-39
Identities = 103/106 (97%), Gaps = 3/106 (2%)
Strand = Plus / Minus
Query: 570 tgtgatcaagtagaggttttatctaatcaatcgttaggatgtttcatatctcattgtggc 629
||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct: 103 tgtgatcaagtagaggttt-atctaatcaatcgttaggatgtt-catatctcattgtggc 46
Query: 630 tggaactccacactagagagcttagtttcaggagtcccagtggtgg 675
||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 45 tggaactccacactagagagcttag-ttcaggagtcccagtggtgg 1