Jatropha Genome Database

JcCB0075891.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0075891.10 - phase: 0 /partial
         (430 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c02122                                                            791   0.0  

>KJC_c02122 
          Length = 1295

 Score =  791 bits (399), Expect = 0.0
 Identities = 404/406 (99%)
 Strand = Plus / Plus

                                                                       
Query: 25  gggtgcctgatggattttgataaccttgttgtgcccattgatgggcttgagacggctcat 84
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 gggtgcctgatggattttgataaccttgttgtgcccattgatgggcttgagacggctcat 390

                                                                       
Query: 85  caaaatggcgttcgtgagcaaagtcctgcctctggggaggaaggtgttttttcaaatagt 144
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 caaaatggcgttcgtgagcaaagtcctgcctctggggaggaaggtgttttttcaaatagt 450

                                                                       
Query: 145 gcaaatggcaatattgagaaaattacagtgtctactgagccagatggaaatttagatgat 204
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 gcaaatggcaatattgagaaaattacagtgtctactgagccagatggaaatttagatgat 510

                                                                       
Query: 205 gcatctaagttggaagacagtggtactggcaactcatatgctgtcgagttcagggaagga 264
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 gcatctaagttggaagacagtggtactggcaactcatatgctgtcgagttcagggaagga 570

                                                                       
Query: 265 tcaaatgtacatgtgggaagcaatggattcactggttctaaggaaggggaattaaaagat 324
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 tcaaatgtacatgtgggaagcaatggattcactggttctaaggaaggggaattaaaagat 630

                                                                       
Query: 325 ggaagtcagtcagagcaagtcaaatcactgaagggccctggaaagggcaagaatgaaaaa 384
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 ggaagtcagtcagagcaagtcaaatcactgaagggccctggaaagggcaagaatgaaaaa 690

                                                         
Query: 385 ccatcaaaccgcaaaactgtctcagccactncagagaagaaagcca 430
           ||||||||||||||||||||||||||||||  ||||||||||||||
Sbjct: 691 ccatcaaaccgcaaaactgtctcagccactcaagagaagaaagcca 736