Jatropha Genome Database
- JcCB0075441.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0075441.10 - phase: 0 /partial
(1413 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c01163 547 e-155
KJC_s19292 147 9e-35
KJC_c09256 64 1e-09
>KJC_c01163
Length = 1184
Score = 547 bits (276), Expect = e-155
Identities = 760/920 (82%), Gaps = 1/920 (0%)
Strand = Plus / Minus
Query: 76 tcacttccaaggtataagatgccggaaaactctatacctaaggaggcggcgtttcagata 135
|||||||| |||| ||||||||||||||||| || || ||||| || |||| ||||||
Sbjct: 1072 tcacttcctaggttcaagatgccggaaaactcgatcccgaaggaagcagcgtatcagatc 1013
Query: 136 ataaatgatgagctgatgcttgatggaaagccaaggctgaatttggcatcttttgtgacg 195
|| || |||||||| ||| | ||||| || |||||||| || |||| || ||||| ||
Sbjct: 1012 atcaacgatgagctaatgttggatgggaatccaaggcttaacctggcctcctttgtaact 953
Query: 196 acctggatggagcctgaatgtgataagcttattatggatgccatgaacaagaactatgtt 255
|| |||||||| ||||||||||||||||||||||||| || || ||||||||||| |||
Sbjct: 952 acatggatggaacctgaatgtgataagcttattatggctggtatcaacaagaactacgtt 893
Query: 256 gacatggatgagtaccctgtcaccacggagcttcagaatcgatgtgtaaacatgatagca 315
||||||||||||||||| |||||||| ||| | ||||| |||||||| ||||||||||||
Sbjct: 892 gacatggatgagtacccggtcaccactgagttgcagaaccgatgtgttaacatgatagca 833
Query: 316 catttattcaatgctccattgggagaatcggaggcggcagtcggggtcggaacagtaggt 375
||| | || || || ||| | ||||| || ||| | || || || || ||||| || ||
Sbjct: 832 catctgtttaacgccccacttggagattcagagactgcggttggagtgggaactgttggg 773
Query: 376 tcatcggaggctataatgctagcagggcttgcattcaagagaaaatggcaaaacaagaga 435
|| || ||||| |||||| |||| || | ||||||||||| |||||||| |||||||||
Sbjct: 772 tcttcagaggcaataatgttagctggattagcattcaagaggaaatggcagaacaagaga 713
Query: 436 aaagctgaaggaaaaccatatgacaagcccaacattgtaactggagccaatgttcaagtc 495
|||||||||||||| || | || ||||| |||||||| ||||| || |||||||| ||
Sbjct: 712 aaagctgaaggaaagcccttcgataagcctaacattgtcactggtgctaatgttcaggtt 653
Query: 496 tgctgggagaaatttgcaaggtattttgaagtagaattaaaggaagtaaagctaagtgaa 555
|| |||||||||||||| ||||||||||||||||| || |||||||| ||||| || ||
Sbjct: 652 tgttgggagaaatttgctaggtattttgaagtagagttgaaggaagtgaagcttagagat 593
Query: 556 gggtgctatgtaatggacccagtcaaggcagtagaaatggtagatgagaacactatttgt 615
|||| ||||| ||||| ||| || ||||| || | || ||||||||||| ||||||
Sbjct: 592 gggtattatgtgatggatccaaagaaagcagtggatttagttgatgagaacacaatttgt 533
Query: 616 gtagctgcaattttgggttctacacttaatggagaatttgaagatgtgaagctattgaat 675
|| ||||| || | || || || |||||||| |||||||||||||| ||||| ||||||
Sbjct: 532 gttgctgctatccttggctccactcttaatggggaatttgaagatgtaaagctcttgaat 473
Query: 676 gatttattagtagagaaaaataaagttacaggatgggatactcctatccatgtggatgca 735
||| | || |||||| || || || ||||||||||| || || ||||||||||||
Sbjct: 472 gatctcttgacagagaagaacaagcaaactggatgggatac-ccaattcatgtggatgca 414
Query: 736 gccagtgggggattcattgcaccatttttgtggccagagcttgaatgggactttagactt 795
|| ||||| ||||| |||||||||||||||| ||||| ||||| ||||| ||||||||
Sbjct: 413 gcaagtggtggatttattgcaccatttttgtatccagaacttgagtgggattttagacta 354
Query: 796 ccattggtgaagagtattaatgttagtggacacaaatatgggcttgtctatgctggtgtt 855
||||| || |||||||| ||||||||||| ||||| ||||| ||||| ||||||||||||
Sbjct: 353 ccattagttaagagtatcaatgttagtggtcacaagtatggacttgtgtatgctggtgtt 294
Query: 856 gggtgggttatttggaggagcaaagaagatttgcctgaagaactcatttttcatattaac 915
|| ||||| ||||||||||||||||| || |||||||||||||| || |||||||| ||
Sbjct: 293 ggttgggtaatttggaggagcaaagaggacttgcctgaagaacttatctttcatatcaat 234
Query: 916 tatcttggaactgatcaacccactttcactctcaatttttcgaaaggttcaagccaaatc 975
|| |||||| |||||||||| || || || |||||||| || |||||||| || |||||
Sbjct: 233 taccttggagctgatcaacctacctttaccctcaatttctccaaaggttctagtcaaatt 174
Query: 976 attgctcaatattatcaact 995
||||||||||| ||||||||
Sbjct: 173 attgctcaatactatcaact 154
>KJC_s19292
Length = 320
Score = 147 bits (74), Expect = 9e-35
Identities = 182/218 (83%)
Strand = Plus / Plus
Query: 406 gcattcaagagaaaatggcaaaacaagagaaaagctgaaggaaaaccatatgacaagccc 465
||||||||||| |||||||| ||||||||||||||||||||||| || | || |||||
Sbjct: 82 gcattcaagaggaaatggcagaacaagagaaaagctgaaggaaagcccttcgataagcct 141
Query: 466 aacattgtaactggagccaatgttcaagtctgctgggagaaatttgcaaggtattttgaa 525
|||||||| ||||| || |||||||| || || |||||||||||||| ||||||||||||
Sbjct: 142 aacattgtcactggtgctaatgttcaggtttgttgggagaaatttgctaggtattttgaa 201
Query: 526 gtagaattaaaggaagtaaagctaagtgaagggtgctatgtaatggacccagtcaaggca 585
||||| || |||||||| ||||| || || |||| ||||| ||||| ||| || |||
Sbjct: 202 gtagagttgaaggaagtgaagcttagagatgggtattatgtgatggatccaaagaaagca 261
Query: 586 gtagaaatggtagatgagaacactatttgtgtagctgc 623
|| || | || ||||||||||| |||||||| |||||
Sbjct: 262 gtggatttagttgatgagaacacaatttgtgttgctgc 299
>KJC_c09256
Length = 514
Score = 63.9 bits (32), Expect = 1e-09
Identities = 113/140 (80%)
Strand = Plus / Plus
Query: 1162 gagtttgaaatagctgatatgctacgtcgttttggatggattgtgcctgcctacacaatg 1221
||||||||||| |||| |||||| | | ||||| |||||||||||||| || ||||||
Sbjct: 9 gagtttgaaatttctgaaatgctaaggaggtttggttggattgtgcctgcatatacaatg 68
Query: 1222 ccagcggatgctcaacacattacggtgcttcgcgtcgtcattagagaagatttctcgcgc 1281
||||| |||||| |||| | || ||| | || || ||||| ||||| || ||||||||
Sbjct: 69 ccagctgatgctgaacatgtaactgtgttgcgtgttgtcataagagaggacttctcgcga 128
Query: 1282 actctcgcggagcgccttgt 1301
|| ||||| ||||| |||||
Sbjct: 129 acactcgctgagcgtcttgt 148