Jatropha Genome Database
- JcCB0074501.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0074501.10 + phase: 2 /partial
(811 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c08517 1459 0.0
>KJC_c08517
Length = 1016
Score = 1459 bits (736), Expect = 0.0
Identities = 784/798 (98%), Gaps = 14/798 (1%)
Strand = Plus / Plus
Query: 17 aacactaact-ggtgtattttg-catggatcagatggtcgtctgcagctgcatgcccaaa 74
|||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 1 aacactaactaggtgtattttgtcatggatcagatggtcgtctgcagctgcatgcccaaa 60
Query: 75 agt-gcttacagggtaagaagaagtcagcatccaagaggataactggctttcagtatttc 133
||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agtagcttacagggtaagaagaagtcagcatccaagaggataactggctttcagt----- 115
Query: 134 tccagtgatccatccagattaatggtcacttctgctgattcaaaagtccgaatccttgat 193
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 116 ------gatccatccagattaatggtcacttctgctgattcaaaagtccgaatccttgat 169
Query: 194 ggtgttgatgtgatatgcaaatatcgaggcatccacaatgcaggaagccaaatatctgca 253
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 170 ggtgttgatgtgatatgcaaatatcgaggcatccacaatgcaggaagccaaatatctgca 229
Query: 254 ttgttcacctcaggtgggacacatattatatctgcaagtgaggattctaatatatatgtc 313
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230 ttgttcacctcaggtgggacacatattatatctgcaagtgaggattctaatatatatgtc 289
Query: 314 tggaactatgctatcaaggatggtcctgtgcctcgcgtaaagaccaattgggcatgtgag 373
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 tggaactatgctatcaaggatggtcctgtgcctcgcgtaaagaccaattgggcatgtgag 349
Query: 374 catttcttctcgaacaatgcatcagttgctataccttggcctgggttggcatgtgggaac 433
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 catttcttctcgaacaatgcatcagttgctataccttggcctgggttggcatgtgggaac 409
Query: 434 tctgcatcttcagatataatgagaacaacattgccctttatgaactcagagagatgtaat 493
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 tctgcatcttcagatataatgagaacaacattgccctttatgaactcagagagatgtaat 469
Query: 494 gaagaacaaatgtcggtacacaaagagttgggtgagagttcacaatgcaaatcgtcattt 553
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 gaagaacaaatgtcggtacacaaagagttgggtgagagttcacaatgcaaatcgtcattt 529
Query: 554 tcttcacctgatcaattttcactgagccatggatttttctccgagtcattgccaaagggt 613
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 tcttcacctgatcaattttcactgagccatggatttttctccgagtcattgccaaagggt 589
Query: 614 tctgcaacctggccagaggaaaatcttccttcctcattaagcatgtcgcctaaaatgttt 673
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 tctgcaacctggccagaggaaaatcttccttcctcattaagcatgtcgcctaaaatgttt 649
Query: 674 aaatcccagtacaagtttttgaggacatcttaccagagcgtccatggttcacctcatgca 733
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 650 aaatcccagtacaagtttttgaggacatcttaccagagcgtccatggttcacctcatgca 709
Query: 734 tggaatttggcgatagtaaccgctggatgggatggacggatcagatggttccagaattat 793
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 710 tggaatttggcgatagtaaccgctggatgggatggacggatcagatggttccagaattat 769
Query: 794 ggattgccagttcgcctt 811
||||||||||||||||||
Sbjct: 770 ggattgccagttcgcctt 787