Jatropha Genome Database

JcCB0071481.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0071481.10 + phase: 1 /partial
         (436 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c03023                                                            664   0.0  

>KJC_c03023 
          Length = 705

 Score =  664 bits (335), Expect = 0.0
 Identities = 335/335 (100%)
 Strand = Plus / Plus

                                                                       
Query: 102 caactcagcttggcttgcgctgccgttgctctctcccgggcaccttttctgaaatctcaa 161
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   caactcagcttggcttgcgctgccgttgctctctcccgggcaccttttctgaaatctcaa 60

                                                                       
Query: 162 gattcccctgctagagctgacagtggatcacaggcatcaaatacttcacaatcaggatct 221
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  gattcccctgctagagctgacagtggatcacaggcatcaaatacttcacaatcaggatct 120

                                                                       
Query: 222 catgttcctaaaggtgctggaaatgacttgtccaggccacaagatacggatgctaatgga 281
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 catgttcctaaaggtgctggaaatgacttgtccaggccacaagatacggatgctaatgga 180

                                                                       
Query: 282 ttggttggaatccactctagcacgcaaaagaaatctggtgttcccatgaagtcaactaca 341
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttggttggaatccactctagcacgcaaaagaaatctggtgttcccatgaagtcaactaca 240

                                                                       
Query: 342 agtggatcatcaagagaacagtcagaagatgatgaaaatgaaggagaaactgagatgaat 401
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 agtggatcatcaagagaacagtcagaagatgatgaaaatgaaggagaaactgagatgaat 300

                                              
Query: 402 atgaaggaccctgctgatgcaaaacgtgtaaggag 436
           |||||||||||||||||||||||||||||||||||
Sbjct: 301 atgaaggaccctgctgatgcaaaacgtgtaaggag 335