Jatropha Genome Database
- JcCB0071431.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0071431.10 - phase: 0
(969 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c00628 1358 0.0
KJC_c03341 714 0.0
KJC_s16024 391 e-108
KJC_c01564 101 3e-21
>KJC_c00628
Length = 864
Score = 1358 bits (685), Expect = 0.0
Identities = 685/685 (100%)
Strand = Plus / Minus
Query: 1 atgagttcggatttggttaggtatgttgagtctgtcctcggggtctcgcttggtggttct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 atgagttcggatttggttaggtatgttgagtctgtcctcggggtctcgcttggtggttct 626
Query: 61 gtgactgattcgcttcttctgattgtcacgacgtcggttgcggtgatagttgggctgttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 gtgactgattcgcttcttctgattgtcacgacgtcggttgcggtgatagttgggctgttt 566
Query: 121 gtgtttttgttgaagaaatcgtcggatcgaagcaaagaggtgaaacctgtggtcgttcca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gtgtttttgttgaagaaatcgtcggatcgaagcaaagaggtgaaacctgtggtcgttcca 506
Query: 181 aagtcacttacggtgaagaaagaggaggatgacgctgaggctcttgctggtaaaactaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 aagtcacttacggtgaagaaagaggaggatgacgctgaggctcttgctggtaaaactaga 446
Query: 241 gttattatcttttatgggactcagactggaacagctgagggctttgctaagtccttatct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gttattatcttttatgggactcagactggaacagctgagggctttgctaagtccttatct 386
Query: 301 gaggagatcaaggcaagatacgagaaagcagctgttaaagttgttgacctggatgattat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gaggagatcaaggcaagatacgagaaagcagctgttaaagttgttgacctggatgattat 326
Query: 361 gctgcggatgatgaagaatatgaagaaaaattgaagaaggagactttgtcatttttcatg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gctgcggatgatgaagaatatgaagaaaaattgaagaaggagactttgtcatttttcatg 266
Query: 421 gttgccacttatggagatggagagccaactgataatgctgcaagattttataagtggttg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gttgccacttatggagatggagagccaactgataatgctgcaagattttataagtggttg 206
Query: 481 actgaggaaaatgaaaggggagtctggcttcaacagctcacttttggagtttttggcttg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 actgaggaaaatgaaaggggagtctggcttcaacagctcacttttggagtttttggcttg 146
Query: 541 ggtaaccgtcaatatgaacattttaataagatagcaaaagtgctcgatgaacaacttagc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 ggtaaccgtcaatatgaacattttaataagatagcaaaagtgctcgatgaacaacttagc 86
Query: 601 gaacaaggtgcaaaacgcctcattcctgtcggtcttggtgatgatgatcaatgcattgaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 85 gaacaaggtgcaaaacgcctcattcctgtcggtcttggtgatgatgatcaatgcattgaa 26
Query: 661 gatgatttttctgcttggaaagaat 685
|||||||||||||||||||||||||
Sbjct: 25 gatgatttttctgcttggaaagaat 1
>KJC_c03341
Length = 480
Score = 714 bits (360), Expect = 0.0
Identities = 400/408 (98%), Gaps = 4/408 (0%)
Strand = Plus / Minus
Query: 565 aataagatagcaaaagtgctcgat-gaacaacttag-cgaacaaggtgcaaaacgcctca 622
|||||||||| |||||||||||| ||||||||||| ||||||||||| |||||| ||||
Sbjct: 480 aataagatagacaaagtgctcgatagaacaacttagacgaacaaggtgaaaaacgactca 421
Query: 623 ttcctgtcggtcttggtgatgatgatcaatgcattgaagatg-atttttctgctt-ggaa 680
|||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||
Sbjct: 420 ttcctgtcggtcttggtgatgatgatcaatgcattgaagatgtatttttctgcttaggaa 361
Query: 681 agaattattatggcctgagttagaccagatactcagagatgaagatgatgtgaatactcc 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 agaattattatggcctgagttagaccagatactcagagatgaagatgatgtgaatactcc 301
Query: 741 ttctactccatatacagctgctattctggaatatcgagtggtgattcatgatgcttctat 800
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 ttctactccatatacagctgctattctggaatatcgagtggtgattcatgatgcttctat 241
Query: 801 gacatcttttgatgataaatcatcacacttggcaaatgggaatactgttttcgatattca 860
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 gacatcttttgatgataaatcatcacacttggcaaatgggaatactgttttcgatattca 181
Query: 861 ccatccatgcagggctaatgttgctgttcaaaaagagctccacaaaccagagtctgacag 920
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 ccatccatgcagggctaatgttgctgttcaaaaagagctccacaaaccagagtctgacag 121
Query: 921 gtcttgcatacatctggagtttgacgtagcagggactggtattacgta 968
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 gtcttgcatacatctggagtttgacgtagcagggactggtattacgta 73
>KJC_s16024
Length = 271
Score = 391 bits (197), Expect = e-108
Identities = 267/281 (95%), Gaps = 11/281 (3%)
Strand = Plus / Plus
Query: 280 ggctttgctaagtccttatctgaggagatcaaggcaagatacgagaaagcagctgttaaa 339
|||||||||||||||||||||||| |||||||||||||||||||| |||||||||||
Sbjct: 1 ggctttgctaagtccttatctgag---atcaaggcaagatacgagaa-gcagctgttaa- 55
Query: 340 gttgttgacctggatgattatgctgcggatgatgaagaatatgaagaaaaattgaagaag 399
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 56 gttgttgacctggatgattatgctgcggatgatgaagaatatgaagaaaa-ttgaagaag 114
Query: 400 gagactttgtcatttttcatggttgccacttatggagatggagagccaactgataatgct 459
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 115 gagactttgtctattttcatggttgccacttatggagatggagagccaactgataatgct 174
Query: 460 gcaagattttataagtggttgactgaggaaaatgaaaggggagtctggcttcaacagctc 519
|||||| ||||||||||||||||||||| ||||||| ||| ||||||||||||||||||
Sbjct: 175 gcaaga-tttataagtggttgactgagg-aaatgaa--gggngtctggcttcaacagctc 230
Query: 520 -acttttggagtttttggcttgggtaaccgtcaatatgaac 559
||||||||||||||||||||||||||||||||||||||||
Sbjct: 231 tacttttggagtttttggcttgggtaaccgtcaatatgaac 271
>KJC_c01564
Length = 1545
Score = 101 bits (51), Expect = 3e-21
Identities = 219/275 (79%)
Strand = Plus / Minus
Query: 427 acttatggagatggagagccaactgataatgctgcaagattttataagtggttgactgag 486
|||||||||||||| ||||||||||||||||| || || || ||||| ||||| || |||
Sbjct: 890 acttatggagatggtgagccaactgataatgcagccaggttctataaatggtttacagag 831
Query: 487 gaaaatgaaaggggagtctggcttcaacagctcacttttggagtttttggcttgggtaac 546
| ||| || || |||| |||||||| | || | |||||||| |||||| | ||||||
Sbjct: 830 ggaaacgagagaggagaatggcttcagaaccttaagtttggagtgtttggcctcggtaac 771
Query: 547 cgtcaatatgaacattttaataagatagcaaaagtgctcgatgaacaacttagcgaacaa 606
|| || ||||||||||||||||| | |||||| | ||||| ||| || ||
Sbjct: 770 aagcagtacgaacattttaataagattggtaaagtgttggatgagattcttgctgagcag 711
Query: 607 ggtgcaaaacgcctcattcctgtcggtcttggtgatgatgatcaatgcattgaagatgat 666
|||||||||||||| | || || |||||||| |||||||| ||||||||||| |||||
Sbjct: 710 ggtgcaaaacgccttgtcccagtgggtcttggagatgatgaccaatgcattgaggatgac 651
Query: 667 ttttctgcttggaaagaattattatggcctgagtt 701
|| |||||||||| |||| | |||||||||||||
Sbjct: 650 ttcactgcttggaaggaatcactatggcctgagtt 616