Jatropha Genome Database
- JcCB0068881.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0068881.10 + phase: 1 /partial
(1568 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c09698 1620 0.0
KJC_c10498 456 e-128
>KJC_c09698
Length = 843
Score = 1620 bits (817), Expect = 0.0
Identities = 838/841 (99%), Gaps = 3/841 (0%)
Strand = Plus / Minus
Query: 695 acccttgattagaacatgctcatctaatgcagttcattgtggaaaggaaaat-ggttttc 753
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 843 acccttgattagaacatgctcatctaatgcagttcattgtggaaaggaaaataggttttc 784
Query: 754 tttcagaatctaatggtgaaacatcaaatt-gctgcaacggtcatgctgaattaggagac 812
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 783 tttcagaatctaatggtgaaacatcaaattagctgcaacggtcatgctgaattaggagac 724
Query: 813 cggtcaatggacactatggaactagaggacacatctggccaagagttatcattccagctc 872
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 723 cggtcaatggacactatggaactagaggacacatctggccaagagttatcattccagctc 664
Query: 873 tttctaacagatgatcggtattcaagtcgcaaaccgatattcaaggattctgtcatcaaa 932
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 tttctaacagatgatcggtattcaagtcgcaaaccgatattcaaggattctgtcatcaaa 604
Query: 933 actgga-gcaaatcatataaaggttttcctagagtggactgaaaatgaacacaagttata 991
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 actggaagcaaatcatataaaggttttcctagagtggactgaaaatgaacacaagttata 544
Query: 992 tgatcctagctatatgaaggatctcccagttgtttatcataaaactgggtttactgcgaa 1051
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 tgatcctagctatatgaaggatctcccagttgtttatcataaaactgggtttactgcgaa 484
Query: 1052 gaagacccggcaggaaggtgtctctttattttcatgtttggaggcattcttgaccgaaga 1111
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 gaagacccggcaggaaggtgtctctttattttcatgtttggaggcattcttgaccgaaga 424
Query: 1112 accgctggggcctgatgacatgtggtactgccctggttgcaaacaacatagacaagccac 1171
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 accgctggggcctgatgacatgtggtactgccctggttgcaaacaacatagacaagccac 364
Query: 1172 caagaaactagatttgtggacattgcctgagattcttgtttttcacttgaaacggttctc 1231
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 caagaaactagatttgtggacattgcctgagattcttgtttttcacttgaaacggttctc 304
Query: 1232 atacagcagatacctgaagaacaaacttgatacttttgtggatttccctattcataatct 1291
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 atacagcagatacctgaagaacaaacttgatacttttgtggatttccctattcataatct 244
Query: 1292 tgatttgagcaaatttgtgaagcggaaagatgggaaatcatatgtatatgaactctatgc 1351
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 tgatttgagcaaatttgtgaagcggaaagatgggaaatcatatgtatatgaactctatgc 184
Query: 1352 catcagcaaccattacggtggtctaggtggtgggcactatacagcttttgcgaagttgat 1411
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 catcagcaaccattacggtggtctaggtggtgggcactatacagcttttgcgaagttgat 124
Query: 1412 cgatgataaaagatggtacaattttgacgacagccgagtttctccagttaacgaggctga 1471
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 cgatgataaaagatggtacaattttgacgacagccgagtttctccagttaacgaggctga 64
Query: 1472 tatcaagacttcagctgcttatgtgttgttctaccaaagagttgaaacagcaacaaaggt 1531
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 tatcaagacttcagctgcttatgtgttgttctaccaaagagttgaaacagcaacaaaggt 4
Query: 1532 g 1532
|
Sbjct: 3 g 3
>KJC_c10498
Length = 491
Score = 456 bits (230), Expect = e-128
Identities = 230/230 (100%)
Strand = Plus / Minus
Query: 1 gaacttcttgccttttactggatgggcttcatgaagatctgaatcgtgtcaagcagaaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230 gaacttcttgccttttactggatgggcttcatgaagatctgaatcgtgtcaagcagaaac 171
Query: 61 cttacattgaaatgaaagattgggatggtcgtccagatgaggaggttgcagacgagtgtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 170 cttacattgaaatgaaagattgggatggtcgtccagatgaggaggttgcagacgagtgtt 111
Query: 121 ggagaaatcacaaggctcgaaatgattctgtaattgtggatgtttgccagggtcaatata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110 ggagaaatcacaaggctcgaaatgattctgtaattgtggatgtttgccagggtcaatata 51
Query: 181 agtcgacactggtctgcccagtttgcagcaaaatttcaattacttttgac 230
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 50 agtcgacactggtctgcccagtttgcagcaaaatttcaattacttttgac 1