Jatropha Genome Database

JcCB0068571.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0068571.20 - phase: 0 
         (240 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c12932                                                            426   e-119

>KJC_c12932 
          Length = 426

 Score =  426 bits (215), Expect = e-119
 Identities = 231/234 (98%), Gaps = 2/234 (0%)
 Strand = Plus / Plus

                                                                       
Query: 9   tgtgtttccagcagaggcatgtgaaactatcggtggagaagcctgtttggcagacatata 68
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 148 tgtgtttccagcagaggcatgtgaaactatcggtggagaagcctgtttggcagacatata 207

                                                                       
Query: 69  tcctgaagtaaagctggaaagggaggccagaaatgaagctggaattgcctcagagcctat 128
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 tcctgaagtaaagctggaaagggaggccagaaatgaagctggaattgcctcagagcctat 267

                                                                       
Query: 129 tgaaagagagtatcttgactacaatgacg-ccaagacggtttttgttggagaggcttgtg 187
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 268 tgaaagagagtatcttgactacaatgacgaccaagacggtttttgttggagaggcttgtg 327

                                                                 
Query: 188 atgatctt-gggggagaattctgtggatttgagtatcagaaaggtgtctactag 240
           |||||||| |||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 328 atgatcttgggggganaattctgtggatttgagtatcagaaaggtgtctactag 381