Jatropha Genome Database
- JcCB0067191.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0067191.20 - phase: 0 /pseudo/partial
(969 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c00944 1082 0.0
KJC_s13358 192 1e-48
>KJC_c00944
Length = 2065
Score = 1082 bits (546), Expect = 0.0
Identities = 546/546 (100%)
Strand = Plus / Minus
Query: 424 atgcctgaatatgatcctgtggccaagatatccatcattccccgtggtcaagctggtggt 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 atgcctgaatatgatcctgtggccaagatatccatcattccccgtggtcaagctggtggt 560
Query: 484 cttacatttttcgctccaagtgaggagcggcttgagtctggactgtacagcagaagttac 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 cttacatttttcgctccaagtgaggagcggcttgagtctggactgtacagcagaagttac 500
Query: 544 ttggagaatcagatggctgttgcattaggtggaagggttgctgaggaggtaatctttggt 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 ttggagaatcagatggctgttgcattaggtggaagggttgctgaggaggtaatctttggt 440
Query: 604 caggataatgtgacaacaggggcttcgaatgacttcatgcaagtttcaagagtagcaagg 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 caggataatgtgacaacaggggcttcgaatgacttcatgcaagtttcaagagtagcaagg 380
Query: 664 cagatggttgagagatttggtttcagcaaaaagattgggcaagttgctatcggtggacct 723
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 cagatggttgagagatttggtttcagcaaaaagattgggcaagttgctatcggtggacct 320
Query: 724 ggtggaaatcccttcttgggtcaacagatgtcatctcaaaaggactactccatggccact 783
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 ggtggaaatcccttcttgggtcaacagatgtcatctcaaaaggactactccatggccact 260
Query: 784 gcggatgtggtggatgcagaggtaagggagctggtggaaagggcatatgcaagggcgaag 843
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 gcggatgtggtggatgcagaggtaagggagctggtggaaagggcatatgcaagggcgaag 200
Query: 844 catatcatcacaactcacattgatattctccacaagcttgctcaactcctcatagagaaa 903
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 catatcatcacaactcacattgatattctccacaagcttgctcaactcctcatagagaaa 140
Query: 904 gaaaccgttgatggagaagagttcatgagcctcttcattgatggaaaagctgaactattt 963
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139 gaaaccgttgatggagaagagttcatgagcctcttcattgatggaaaagctgaactattt 80
Query: 964 gttgcc 969
||||||
Sbjct: 79 gttgcc 74
Score = 844 bits (426), Expect = 0.0
Identities = 426/426 (100%)
Strand = Plus / Minus
Query: 1 agactattaatcagttgttgactgaaatggatggattttctggtaattcaggtgttatag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1074 agactattaatcagttgttgactgaaatggatggattttctggtaattcaggtgttatag 1015
Query: 61 tgttggctgccactaatagacctgatgttcttgattcggctttgttaagacctggaaggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1014 tgttggctgccactaatagacctgatgttcttgattcggctttgttaagacctggaaggt 955
Query: 121 ttgatagacaggttactgtcgacaggcctgatgttgctggtagagttagaatactccagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 954 ttgatagacaggttactgtcgacaggcctgatgttgctggtagagttagaatactccagg 895
Query: 181 ttcactcaagagggaaggcccttgcaaaggatgtggactttgaaaagattgcacggagaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 894 ttcactcaagagggaaggcccttgcaaaggatgtggactttgaaaagattgcacggagaa 835
Query: 241 ccccaggattcactggagctgacttgcagaatttgatgaatgaagctgccatacttgcag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 834 ccccaggattcactggagctgacttgcagaatttgatgaatgaagctgccatacttgcag 775
Query: 301 ctaggcgtgaccttaaagaaattagcaaagatgagatctctgatgctttggaaaggatca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 774 ctaggcgtgaccttaaagaaattagcaaagatgagatctctgatgctttggaaaggatca 715
Query: 361 ttgccggaccagagaagaaaaatgcggttgtctcagatgagaagaagaaattagttgcct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 714 ttgccggaccagagaagaaaaatgcggttgtctcagatgagaagaagaaattagttgcct 655
Query: 421 atcatg 426
||||||
Sbjct: 654 atcatg 649
>KJC_s13358
Length = 275
Score = 192 bits (97), Expect = 1e-48
Identities = 97/97 (100%)
Strand = Plus / Plus
Query: 424 atgcctgaatatgatcctgtggccaagatatccatcattccccgtggtcaagctggtggt 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119 atgcctgaatatgatcctgtggccaagatatccatcattccccgtggtcaagctggtggt 178
Query: 484 cttacatttttcgctccaagtgaggagcggcttgagt 520
|||||||||||||||||||||||||||||||||||||
Sbjct: 179 cttacatttttcgctccaagtgaggagcggcttgagt 215
Score = 168 bits (85), Expect = 2e-41
Identities = 88/89 (98%)
Strand = Plus / Plus
Query: 338 ctctgatgctttggaaaggatcattgccggaccagagaagaaaaatgcggttgtctcaga 397
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctctgatgctctggaaaggatcattgccggaccagagaagaaaaatgcggttgtctcaga 60
Query: 398 tgagaagaagaaattagttgcctatcatg 426
|||||||||||||||||||||||||||||
Sbjct: 61 tgagaagaagaaattagttgcctatcatg 89
Score = 133 bits (67), Expect = 9e-31
Identities = 67/67 (100%)
Strand = Plus / Minus
Query: 124 atagacaggttactgtcgacaggcctgatgttgctggtagagttagaatactccaggttc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 atagacaggttactgtcgacaggcctgatgttgctggtagagttagaatactccaggttc 216
Query: 184 actcaag 190
|||||||
Sbjct: 215 actcaag 209