Jatropha Genome Database
- JcCB0067191.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0067191.10 + phase: 0 /pseudo/partial
(699 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c04768 466 e-131
KJC_c03580 450 e-126
KJC_c04604 66 1e-10
>KJC_c04768
Length = 494
Score = 466 bits (235), Expect = e-131
Identities = 235/235 (100%)
Strand = Plus / Minus
Query: 1 ggaaaaacatccttctcttaatggattcacatttggagggaaacttttcaactgaagagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 235 ggaaaaacatccttctcttaatggattcacatttggagggaaacttttcaactgaagagg 176
Query: 61 caacagtggtctttgatcttgcttcacgatgtttacaatatgaacctagagagcggccaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 175 caacagtggtctttgatcttgcttcacgatgtttacaatatgaacctagagagcggccaa 116
Query: 121 ataccaaggacctggttgcaacaattgagcctctgcaaaataaacccgatgttccgtctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 115 ataccaaggacctggttgcaacaattgagcctctgcaaaataaacccgatgttccgtctt 56
Query: 181 atgtgatgcttggaattcaaaagcacgaggaagcgccgcctacaccacaacaccc 235
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55 atgtgatgcttggaattcaaaagcacgaggaagcgccgcctacaccacaacaccc 1
>KJC_c03580
Length = 1073
Score = 450 bits (227), Expect = e-126
Identities = 553/659 (83%), Gaps = 2/659 (0%)
Strand = Plus / Minus
Query: 18 ttaatggattcacatttggagggaaacttttcaactgaagaggcaacagtggtctttgat 77
|||||||| ||||||||||||||||| ||||| || ||||| ||||| ||||| |||||
Sbjct: 824 ttaatggactcacatttggagggaaagttttccacagaagaagcaactgtggttgttgat 765
Query: 78 cttgcttcacgatgtttacaatatgaacctagagagcggccaaataccaaggacctggtt 137
||||| || | |||||| ||||||||||||||||| ||||| | || ||||| || |||
Sbjct: 764 cttgcctctcaatgtttgcaatatgaacctagagaacggcctagcacaaaggatcttgtt 705
Query: 138 gcaacaattgagcctctgcaaaataaacccgatgttccgtcttatgtgatgcttggaatt 197
| |||| | | || ||||||| ||||| |||||||| || ||||| ||||||||||||
Sbjct: 704 ggaacactggctcccctgcaaatgaaacctgatgttccatcatatgtaatgcttggaatt 645
Query: 198 caaaagcacgaggaagcgccgcctacaccacaacaccctctttctccaatgggtgatgca 257
||| || |||||||| ||||| || || | || ||||| || ||||||||||| ||
Sbjct: 644 gcaaaacatgaggaagcaccgccaactcctccacgtcctctctcaccaatgggtgaggcc 585
Query: 258 tgttcacgaatggatctcacagctatccatcagatcttggtcatgacgcactacaaggat 317
|||||||| |||||||||||||| || |||||||||||||| ||||| || || || |||
Sbjct: 584 tgttcacggatggatctcacagcaattcatcagatcttggttatgacacattataaagat 525
Query: 318 gatgaaggaacaaatgagctatcattccaagagtggacccaacaaatgagagatatg-tg 376
||||| ||||| |||||| |||| |||||||| ||||| |||||||||||||||||| ||
Sbjct: 524 gatgagggaacgaatgagttatctttccaagaatggacacaacaaatgagagatatgctg 465
Query: 377 gaggcaagaaagcgtggagacgtagcatttcgtgacaaagagtt-aaaactgcaatagag 435
||| |||| || || || ||| | ||||| ||||| ||||| || |||||||| || ||
Sbjct: 464 gagtcaaggaaacgaggggactttgcattccgtgataaagattttaaaactgccattgac 405
Query: 436 tgtatttctcagttcatagatgtcggaacaatggtttctccaactgtttatgcacggaga 495
||| ||| ||||||||||| || ||||||||||||||||||||||||| ||||||| |
Sbjct: 404 tgttattcccagttcatagacgtaggaacaatggtttctccaactgtttttgcacggcgc 345
Query: 496 agtctttgctatcttttatgtgatcaaccagatgctgccctccgagatgctatgcaagca 555
|||||||| ||||||||||| ||||||||||| || ||||| |||||||| |||||||||
Sbjct: 344 agtctttgttatcttttatgcgatcaaccagacgccgcccttcgagatgcaatgcaagca 285
Query: 556 caatgtgtataccctgaatggtctacagcattttacatgcaagcagtcgcccttgccaag 615
||||||||||| || || ||| | ||||| ||||||||||| |||| |||||||||||
Sbjct: 284 caatgtgtatatccggagtggccaacagccttttacatgcagtcagttgcccttgccaaa 225
Query: 616 ctagatatgcataaagatgcaactgacatgttgaatgaggctgctgccctagaagaaaa 674
||||| |||||||| ||||| | |||||||||||||| |||||||| |||||||||||
Sbjct: 224 ctagacatgcataatgatgccgccgacatgttgaatgaagctgctgcactagaagaaaa 166
>KJC_c04604
Length = 909
Score = 65.9 bits (33), Expect = 1e-10
Identities = 57/65 (87%)
Strand = Plus / Minus
Query: 445 cagttcatagatgtcggaacaatggtttctccaactgtttatgcacggagaagtctttgc 504
|||||||| ||||| || || |||||||||||||||||||||||||| ||||||| | |
Sbjct: 231 cagttcattgatgttgggaccatggtttctccaactgtttatgcacgccgaagtctatcc 172
Query: 505 tatct 509
|||||
Sbjct: 171 tatct 167