Jatropha Genome Database
- JcCB0066311.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0066311.10 - phase: 0 /partial
(730 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c00419 1344 0.0
KJC_s19378 224 2e-58
>KJC_c00419
Length = 1351
Score = 1344 bits (678), Expect = 0.0
Identities = 678/678 (100%)
Strand = Plus / Minus
Query: 1 atggtaacaagaacagtcgatctccgctctgacactgtcactaaaccaaccgaagcgatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1226 atggtaacaagaacagtcgatctccgctctgacactgtcactaaaccaaccgaagcgatg 1167
Query: 61 agagcagctatggcaaacgctgaggttgatgatgatgttctgggagatgacccaaacgcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1166 agagcagctatggcaaacgctgaggttgatgatgatgttctgggagatgacccaaacgcc 1107
Query: 121 ttacgattacagaccgaaatggccagaatcatgggcaaggaagcagctctatttgttcca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1106 ttacgattacagaccgaaatggccagaatcatgggcaaggaagcagctctatttgttcca 1047
Query: 181 tcaggcactatgggtaaccttattagtgtgcttgtgcattgtgacattagaggaagtgaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1046 tcaggcactatgggtaaccttattagtgtgcttgtgcattgtgacattagaggaagtgaa 987
Query: 241 gtcattcttggacacgattctcatatccacatatatgagaatggaggcatttcaacactc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 986 gtcattcttggacacgattctcatatccacatatatgagaatggaggcatttcaacactc 927
Query: 301 ggtggtgtgcatccaaggacagtgaagaataacaaggatggaacaatggatatcgattta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 926 ggtggtgtgcatccaaggacagtgaagaataacaaggatggaacaatggatatcgattta 867
Query: 361 attgaagctgccatcagagatccgaaatggcagcttgtgtatccaactactaggcttatc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 866 attgaagctgccatcagagatccgaaatggcagcttgtgtatccaactactaggcttatc 807
Query: 421 tgtttggaaaattcacatgccaactgtggtggtagatgcctatctgtagaatatacagat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 806 tgtttggaaaattcacatgccaactgtggtggtagatgcctatctgtagaatatacagat 747
Query: 481 aaagttggtgaattagctaaaaagtacggtttgaagcttcacatagatggggctcgcatt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746 aaagttggtgaattagctaaaaagtacggtttgaagcttcacatagatggggctcgcatt 687
Query: 541 ttcaatgcagcagctgcacttaaagttcctgtacataggcttgttcaagctgctgattca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 ttcaatgcagcagctgcacttaaagttcctgtacataggcttgttcaagctgctgattca 627
Query: 601 gtttcggtatgcctatcaaaaggtttaggtgcaccagttggaaccgttatcgttggttca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 gtttcggtatgcctatcaaaaggtttaggtgcaccagttggaaccgttatcgttggttca 567
Query: 661 aaaagctttatcgctaag 678
||||||||||||||||||
Sbjct: 566 aaaagctttatcgctaag 549
Score = 60.0 bits (30), Expect = 8e-09
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 701 agtctagaatcctaaggaaaacattaggag 730
||||||||||||||||||||||||||||||
Sbjct: 550 agtctagaatcctaaggaaaacattaggag 521
>KJC_s19378
Length = 217
Score = 224 bits (113), Expect = 2e-58
Identities = 113/113 (100%)
Strand = Plus / Minus
Query: 444 ctgtggtggtagatgcctatctgtagaatatacagataaagttggtgaattagctaaaaa 503
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 ctgtggtggtagatgcctatctgtagaatatacagataaagttggtgaattagctaaaaa 144
Query: 504 gtacggtttgaagcttcacatagatggggctcgcattttcaatgcagcagctg 556
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143 gtacggtttgaagcttcacatagatggggctcgcattttcaatgcagcagctg 91