Jatropha Genome Database

JcCB0065721.30
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0065721.30 - phase: 1 /partial
         (329 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c08202                                                            297   9e-81

>KJC_c08202 
          Length = 390

 Score =  297 bits (150), Expect = 9e-81
 Identities = 205/222 (92%), Gaps = 1/222 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   aattgcaatttatggtaagaaaaggcaggataagagatgcaatgaggcttgtgacaaaga 60
           |||||| || |||||||||| | |||||| ||||||||||||||||||||||| ||||||
Sbjct: 170 aattgctatgtatggtaagaca-ggcaggctaagagatgcaatgaggcttgtggcaaaga 228

                                                                       
Query: 61  tgaaagtaaatggctgtgaaccaaatgtctggatatacaattttctattagatatgcaag 120
           |||||||||||||||||||||| ||||||||||||||||||| |||||| |||||||| |
Sbjct: 229 tgaaagtaaatggctgtgaaccgaatgtctggatatacaattctctattggatatgcatg 288

                                                                       
Query: 121 gaagagtcaatagtttgaggcaggtagagaagctatggaaagaaatgaagagaaggaaaa 180
           |||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 gaagagtcaagaacttgaggcaggtagagaagctatggaaagaaatgaagagaaggaaaa 348

                                                     
Query: 181 tcgccccagataaagttacttgcacaggtgttattagtgctt 222
           ||||||| ||||||||||||| |||  |||||||||||||||
Sbjct: 349 tcgccccggataaagttacttacactagtgttattagtgctt 390