Jatropha Genome Database

JcCB0064191.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0064191.10 + phase: 1 /partial
         (617 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c02320                                                            484   e-136

>KJC_c02320 
          Length = 714

 Score =  484 bits (244), Expect = e-136
 Identities = 244/244 (100%)
 Strand = Plus / Minus

                                                                       
Query: 50  gatcatagagccacttgcttcaagatgtgcgaaattcaggtttaagccactttcagaaga 109
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 gatcatagagccacttgcttcaagatgtgcgaaattcaggtttaagccactttcagaaga 185

                                                                       
Query: 110 catcatgagcgatcgtatattgtacatttgcaaagaagaaggccttaatatagatgcaga 169
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 catcatgagcgatcgtatattgtacatttgcaaagaagaaggccttaatatagatgcaga 125

                                                                       
Query: 170 ggccctttccaccttaagctctatatcacaaggggatcttcgtcgggctatcacttattt 229
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 ggccctttccaccttaagctctatatcacaaggggatcttcgtcgggctatcacttattt 65

                                                                       
Query: 230 gcaaggggctgctcgcttatttggatcaacaatttcatcaaaggacctaataagtgtatc 289
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64  gcaaggggctgctcgcttatttggatcaacaatttcatcaaaggacctaataagtgtatc 5

               
Query: 290 tggg 293
           ||||
Sbjct: 4   tggg 1