Jatropha Genome Database
- JcCB0063661.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0063661.10 + phase: 0
(726 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c02807 1195 0.0
KJC_c00598 143 7e-34
KJC_c02206 94 6e-19
KJC_c04815 72 2e-12
KJC_c00215 72 2e-12
KJC_s18796 70 8e-12
KJC_c04821 52 2e-06
>KJC_c02807
Length = 794
Score = 1195 bits (603), Expect = 0.0
Identities = 603/603 (100%)
Strand = Plus / Plus
Query: 124 ggatttgcagagactgttgatttgaagcttaatcttcaagctaaagatggtgttatggat 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggatttgcagagactgttgatttgaagcttaatcttcaagctaaagatggtgttatggat 60
Query: 184 ctgaatgaaaatatcaagaatgcttcaaaggacaagaatcacctcccaacttccaccatc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctgaatgaaaatatcaagaatgcttcaaaggacaagaatcacctcccaacttccaccatc 120
Query: 244 aaggaccctgccaagccaccagccaaagctcaagttgtgggttggcccccagttagatct 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aaggaccctgccaagccaccagccaaagctcaagttgtgggttggcccccagttagatct 180
Query: 304 tacaggaagaacataatggccaatcagaagaacaacagtgatgaaggtgaaaagagtttg 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tacaggaagaacataatggccaatcagaagaacaacagtgatgaaggtgaaaagagtttg 240
Query: 364 agtgcagcatttgtgaaggtttgcatggatggtgcaccttatcttcgtaaggtagacctt 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 agtgcagcatttgtgaaggtttgcatggatggtgcaccttatcttcgtaaggtagacctt 300
Query: 424 aagatgtacaaaagctaccaagagctatctgatgccctagccaaaatgttcagttccttc 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aagatgtacaaaagctaccaagagctatctgatgccctagccaaaatgttcagttccttc 360
Query: 484 actatgggtaattatggagcccaaggaatgatagactttatgaatgaaagcaagttgatg 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 actatgggtaattatggagcccaaggaatgatagactttatgaatgaaagcaagttgatg 420
Query: 544 gatctcctcaacagctctgaatatgtgccaacctatgaagataaggatggtgactggatg 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gatctcctcaacagctctgaatatgtgccaacctatgaagataaggatggtgactggatg 480
Query: 604 ctcgtgggcgatgttccatgggagatgtttgttgattcatgcaagcgcttgcgcattatg 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ctcgtgggcgatgttccatgggagatgtttgttgattcatgcaagcgcttgcgcattatg 540
Query: 664 aaaggatctgaagctattggtcttgcaccaagagctatggagaaatgcaagagtagaact 723
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aaaggatctgaagctattggtcttgcaccaagagctatggagaaatgcaagagtagaact 600
Query: 724 taa 726
|||
Sbjct: 601 taa 603
>KJC_c00598
Length = 889
Score = 143 bits (72), Expect = 7e-34
Identities = 234/288 (81%)
Strand = Plus / Minus
Query: 428 tgtacaaaagctaccaagagctatctgatgccctagccaaaatgttcagttccttcacta 487
||||||| ||||||||||| || || || || |||| |||||||||||| ||||| || |
Sbjct: 329 tgtacaagagctaccaagaactctcagacgctctaggcaaaatgttcagctcctttacaa 270
Query: 488 tgggtaattatggagcccaaggaatgatagactttatgaatgaaagcaagttgatggatc 547
| ||||||| |||| | |||||||||| |||||| |||||||| ||||| ||||| || |
Sbjct: 269 ttggtaattgtggatcacaaggaatgaaagacttcatgaatgagagcaaattgattgacc 210
Query: 548 tcctcaacagctctgaatatgtgccaacctatgaagataaggatggtgactggatgctcg 607
| | || | ||||| ||||| ||||| |||||||| || ||||| ||||||||||| |
Sbjct: 209 ttttgaatggttctgagtatgtaccaacttatgaagacaaagatggagactggatgcttg 150
Query: 608 tgggcgatgttccatgggagatgtttgttgattcatgcaagcgcttgcgcattatgaaag 667
| || ||||| || ||||| |||||| | ||||||||||| || || | || |||||||
Sbjct: 149 taggagatgtgccttgggaaatgtttatcgattcatgcaaacgattaagaataatgaaag 90
Query: 668 gatctgaagctattggtcttgcaccaagagctatggagaaatgcaaga 715
| |||||||| || || ||||| || |||||| ||||||| |||||||
Sbjct: 89 gctctgaagcgatcggacttgcccctagagctgtggagaagtgcaaga 42
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 114 tggaaaaagaggatttgcagagactgttgatttgaagcttaatctt 159
|||||| ||||||||| |||| ||||| ||||| ||||||||||||
Sbjct: 643 tggaaagagaggattttcagaaactgtggatttaaagcttaatctt 598
Score = 50.1 bits (25), Expect = 8e-06
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 250 cctgccaagccaccagccaaagctcaagttgtgggttggcc 290
||||| || |||||||||||||| || ||||||||||||||
Sbjct: 531 cctgcaaaaccaccagccaaagcacaggttgtgggttggcc 491
>KJC_c02206
Length = 817
Score = 93.7 bits (47), Expect = 6e-19
Identities = 131/159 (82%)
Strand = Plus / Minus
Query: 557 gctctgaatatgtgccaacctatgaagataaggatggtgactggatgctcgtgggcgatg 616
||||||||||||| | || |||||||||||||| |||||||||||||| || |||||||
Sbjct: 414 gctctgaatatgttctcacatatgaagataaggacggtgactggatgcttgtcggcgatg 355
Query: 617 ttccatgggagatgtttgttgattcatgcaagcgcttgcgcattatgaaaggatctgaag 676
| || |||||||||||| || |||||| | | ||| | || |||||||| || || |
Sbjct: 354 tgccctgggagatgtttacggacacatgcaggagattgaggatcatgaaaggttcagagg 295
Query: 677 ctattggtcttgcaccaagagctatggagaaatgcaaga 715
||||||| ||||| ||||| || ||||||||||| ||||
Sbjct: 294 ctattgggcttgctccaagggccatggagaaatgtaaga 256
>KJC_c04815
Length = 845
Score = 71.9 bits (36), Expect = 2e-12
Identities = 72/84 (85%)
Strand = Plus / Plus
Query: 565 tatgtgccaacctatgaagataaggatggtgactggatgctcgtgggcgatgttccatgg 624
||||||| ||| || || ||||||||||| || |||||||| || || ||||| ||||||
Sbjct: 651 tatgtgctaacatacgaggataaggatggcgattggatgcttgttggggatgtgccatgg 710
Query: 625 gagatgtttgttgattcatgcaag 648
||||||||| ||||| ||||||||
Sbjct: 711 gagatgtttattgatacatgcaag 734
>KJC_c00215
Length = 1768
Score = 71.9 bits (36), Expect = 2e-12
Identities = 63/72 (87%)
Strand = Plus / Plus
Query: 577 tatgaagataaggatggtgactggatgctcgtgggcgatgttccatgggagatgtttgtt 636
||||| ||||| |||||||| |||||||| || || |||||||||||||||||||| ||
Sbjct: 1230 tatgaggataaagatggtgattggatgcttgttggtgatgttccatgggagatgttcatt 1289
Query: 637 gattcatgcaag 648
||| ||||||||
Sbjct: 1290 gatacatgcaag 1301
>KJC_s18796
Length = 467
Score = 69.9 bits (35), Expect = 8e-12
Identities = 87/103 (84%), Gaps = 1/103 (0%)
Strand = Plus / Plus
Query: 428 tgtacaaaagctaccaagagctatctgatgccctagccaaaatgttcagttccttcacta 487
||||||| ||||||||||| || || || || |||| |||||||||||| ||||| || |
Sbjct: 363 tgtacaagagctaccaagaactctcagacgctctaggcaaaatgttcagctcctt-acaa 421
Query: 488 tgggtaattatggagcccaaggaatgatagactttatgaatga 530
| ||||||| |||| | |||||||||| |||||| ||||||||
Sbjct: 422 ttggtaattgtggatcacaaggaatgaaagacttcatgaatga 464
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 114 tggaaaaagaggatttgcagagactgttgatttgaagcttaatctt 159
|||||| ||||||||| |||| ||||| ||||| ||||||||||||
Sbjct: 56 tggaaagagaggattttcagaaactgtggatttaaagcttaatctt 101
>KJC_c04821
Length = 403
Score = 52.0 bits (26), Expect = 2e-06
Identities = 77/94 (81%)
Strand = Plus / Minus
Query: 622 tgggagatgtttgttgattcatgcaagcgcttgcgcattatgaaaggatctgaagctatt 681
||||| |||||| | ||||||||||| || || | || |||||||| |||||||| ||
Sbjct: 385 tgggaaatgtttatcgattcatgcaaacgattaagaataatgaaaggctctgaagcgatc 326
Query: 682 ggtcttgcaccaagagctatggagaaatgcaaga 715
|| ||||| || |||||| ||||||| |||||||
Sbjct: 325 ggacttgcccctagagctgtggagaagtgcaaga 292