Jatropha Genome Database
- JcCB0062371.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0062371.10 + phase: 0
(753 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c02316 379 e-105
KJC_c01647 98 4e-20
KJC_c05670 56 1e-07
>KJC_c02316
Length = 621
Score = 379 bits (191), Expect = e-105
Identities = 326/371 (87%)
Strand = Plus / Minus
Query: 40 gaggttttcagggacttcaagggccgtagagctggaatgatcaaagccctcactactgat 99
||||| || ||||| ||||| || ||||||||||| ||||| ||||| ||||||||||||
Sbjct: 423 gaggtctttagggatttcaaagggcgtagagctggcatgattaaagctctcactactgat 364
Query: 100 gtagaagagttctatcagcagtgcgatcctgagaaggaaaatctttgcctgtatggattc 159
|| ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 363 gttgaagagttctaccagcagtgcgatcctgagaaggaaaatctttgtctgtatggattt 304
Query: 160 cctaatgaacagtgggaagtcaatttacctgctgaagaagtgcctccagagcttccggag 219
|| | ||| |||||||| |||||||| ||||||||||| || |||||||||||||| |||
Sbjct: 303 cccagtgagcagtgggaggtcaatttgcctgctgaagaggttcctccagagcttccagag 244
Query: 220 cctgcattaggtattaactttgcgagagatgggatgcaagaaaaagattggctttctcta 279
||||| || |||||||||||||| |||||||| ||||||||||| || ||| | |||||
Sbjct: 243 cctgctttgggtattaactttgccagagatggaatgcaagaaaaggactggttgtctctg 184
Query: 280 gtagctgttcatagtgatgcatggttacttgctgtggctttctatttcggtgctagattt 339
|| |||||||| ||||||||||||||||||||||| || || ||||| || ||||| |||
Sbjct: 183 gttgctgttcacagtgatgcatggttacttgctgttgccttttattttggggctaggttt 124
Query: 340 ggttttgataaagctgacaggaaacgtctcttcactatgataaatgatcttcccacaata 399
|| ||||| |||||||| ||||| |||||||||| ||||||||||||||||| || |||
Sbjct: 123 ggatttgacaaagctgataggaagcgtctcttcaacatgataaatgatcttccaacgata 64
Query: 400 tttgaggttgt 410
|||||||||||
Sbjct: 63 tttgaggttgt 53
>KJC_c01647
Length = 828
Score = 97.6 bits (49), Expect = 4e-20
Identities = 196/245 (80%)
Strand = Plus / Minus
Query: 88 ctcactactgatgtagaagagttctatcagcagtgcgatcctgagaaggaaaatctttgc 147
||||| |||||||| || ||||||| ||||||||||||||||| |||||||| || ||
Sbjct: 506 ctcaccactgatgttgagaagttctaccagcagtgcgatcctgaaaaggaaaacctgtgt 447
Query: 148 ctgtatggattccctaatgaacagtgggaagtcaatttacctgctgaagaagtgcctcca 207
|| |||||| | || |||||| ||||||||| || | |||| || || ||||||||
Sbjct: 446 ctatatggacttccaaatgaaacgtgggaagttaacctgcctgtggaggaggtgcctcct 387
Query: 208 gagcttccggagcctgcattaggtattaactttgcgagagatgggatgcaagaaaaagat 267
|||||||| ||||| ||||| ||||| || ||||| || ||||||||||| || || ||
Sbjct: 386 gagcttcctgagcccgcattgggtatcaattttgctagggatgggatgcaggacaaggac 327
Query: 268 tggctttctctagtagctgttcatagtgatgcatggttacttgctgtggctttctatttc 327
||| | || || || || ||||| |||||| | ||||| |||||||| || || |||||
Sbjct: 326 tggttatcacttgttgcagttcacagtgattcttggttgcttgctgtagcattttatttt 267
Query: 328 ggtgc 332
|||||
Sbjct: 266 ggtgc 262
>KJC_c05670
Length = 558
Score = 56.0 bits (28), Expect = 1e-07
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 262 aaagattggctttctctagtagctgttcatagtgatgcatggttacttgctgtggctttc 321
||||| |||||||| || || ||||| ||||||||| | ||||| || |||||||||||
Sbjct: 356 aaagactggctttcacttgttgctgtgcatagtgattcgtggttgatttctgtggctttc 415
Query: 322 tatttcgg 329
||||||||
Sbjct: 416 tatttcgg 423