Jatropha Genome Database

JcCB0060791.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0060791.10 - phase: 0 /partial
         (668 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c10922                                                            428   e-120

>KJC_c10922 
          Length = 746

 Score =  428 bits (216), Expect = e-120
 Identities = 216/216 (100%)
 Strand = Plus / Minus

                                                                       
Query: 447 agaagaacttatcaatgatgtgattgctgagacagatgcagggggctctgcttcatctgc 506
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 agaagaacttatcaatgatgtgattgctgagacagatgcagggggctctgcttcatctgc 681

                                                                       
Query: 507 agttcatggattggatacaaagcaaactggaggtgaacagttcgcgatgaaagtcccaaa 566
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 agttcatggattggatacaaagcaaactggaggtgaacagttcgcgatgaaagtcccaaa 621

                                                                       
Query: 567 tgacaaggttggattgcttattggcaagagtggtgacaccataaagtacatgcaaaacag 626
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 tgacaaggttggattgcttattggcaagagtggtgacaccataaagtacatgcaaaacag 561

                                               
Query: 627 atcaggggctcgtatgcagattattcccctccacct 662
           ||||||||||||||||||||||||||||||||||||
Sbjct: 560 atcaggggctcgtatgcagattattcccctccacct 525