Jatropha Genome Database
- JcCB0059751.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0059751.10 + phase: 0 /pseudo/partial
(747 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c09840 587 e-167
KJC_c06333 188 1e-47
>KJC_c09840
Length = 462
Score = 587 bits (296), Expect = e-167
Identities = 303/304 (99%), Gaps = 1/304 (0%)
Strand = Plus / Minus
Query: 1 gttagaggatgtgatgtatatctattacaaccaacctgcccctcagcaaatgagaatctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 gttagaggatgtgatgtatatctattacaaccaacctgcccctcagcaaatgagaatctc 318
Query: 61 atggagcttttgatcatgatagatgcatgcaggagagcatcagcaaagaatatcactgct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 atggagcttttgatcatgatagatgcatgcaggagagcatcagcaaagaatatcactgct 258
Query: 121 gtgattccctattttggatatgccagagtctgatagaaagactgaaggtcgtgaatctat 180
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 257 gtgattccctattttggatatgccagag-ctgatagaaagactgaaggtcgtgaatctat 199
Query: 181 tgcggccaaacttgtcgcaaatcttatcacagaagctggtgcaaatcgcgttcttgcctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 tgcggccaaacttgtcgcaaatcttatcacagaagctggtgcaaatcgcgttcttgcctg 139
Query: 241 tgatcttcattcaggccagtccatgggctattttgatatttctgttgaccatgtgtactg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 138 tgatcttcattcaggccagtccatgggctattttgatatttctgttgaccatgtgtactg 79
Query: 301 ccag 304
||||
Sbjct: 78 ccag 75
>KJC_c06333
Length = 482
Score = 188 bits (95), Expect = 1e-47
Identities = 243/291 (83%), Gaps = 1/291 (0%)
Strand = Plus / Minus
Query: 4 agaggatgtgatgtatatctattacaaccaacctgcccctcagcaaatgagaatctcatg 63
|||||||||||||| ||||| | ||||| || || || | |||||||||||||| |||
Sbjct: 444 agaggatgtgatgtttatcttgttcaacccacatgtcctcctgcaaatgagaatcttatg 385
Query: 64 gagcttttgatcatgatagatgcatgcaggagagcatcagcaaagaatatcactgctgtg 123
|||||| |||| ||||| ||||| || |||||||||| || || ||||| |||||||||
Sbjct: 384 gagcttctgataatgattgatgcttgtcggagagcatcggccaaaaatattactgctgtg 325
Query: 124 attccctattttggatatgccagagtctgatagaaagactgaaggtcgtgaatctattgc 183
||||| |||||||| |||||||| | ||||||| |||||| |||| |||||||| |||||
Sbjct: 324 attccatattttggttatgccaggg-ctgataggaagactcaagggcgtgaatccattgc 266
Query: 184 ggccaaacttgtcgcaaatcttatcacagaagctggtgcaaatcgcgttcttgcctgtga 243
||||||||||| |||||| | || ||||||||||||| ||| || |||||||| |||||
Sbjct: 265 tgccaaacttgttgcaaatttgattacagaagctggtgtaaaccgtgttcttgcttgtga 206
Query: 244 tcttcattcaggccagtccatgggctattttgatatttctgttgaccatgt 294
||||| || || ||||| ||||| |||||||| ||| |||| || |||||
Sbjct: 205 ccttcactctgggcagtcaatggggtattttgacattcctgtggatcatgt 155
Score = 99.6 bits (50), Expect = 9e-21
Identities = 80/90 (88%)
Strand = Plus / Minus
Query: 304 gtggtttcacctgatgttggtggagttgcaagagcacgtgcttttgcaaagaagttgtct 363
||||| || |||||||||||||| || |||||||||||||||||||| ||||| || |||
Sbjct: 90 gtggtctctcctgatgttggtggcgtagcaagagcacgtgcttttgccaagaaattatct 31
Query: 364 gatgcccctttagctattgtggataaaagg 393
||||| ||| | ||||||||||||||||||
Sbjct: 30 gatgcacctctggctattgtggataaaagg 1