Jatropha Genome Database

JcCB0059061.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0059061.10 + phase: 0 /partial
         (738 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c10568                                                            527   e-149

>KJC_c10568 
          Length = 626

 Score =  527 bits (266), Expect = e-149
 Identities = 266/266 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   atgggaacagaatatgtcaatggacaaacaaaaccaacttggagattgatagatgggatc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 atgggaacagaatatgtcaatggacaaacaaaaccaacttggagattgatagatgggatc 207

                                                                       
Query: 61  tgtaaagaaagccttgcttttgaaaccgcaaagaaggaagggatcccagaaacaattgtc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 tgtaaagaaagccttgcttttgaaaccgcaaagaaggaagggatcccagaaacaattgtc 147

                                                                       
Query: 121 caaagagctgaagaattgtatttttctgcttatgctaaaaaagtctctcccgaaaggatt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 146 caaagagctgaagaattgtatttttctgcttatgctaaaaaagtctctcccgaaaggatt 87

                                                                       
Query: 181 gaagaaagaaaaagaccaatccattctagcggaactgttaatggctccaatgaagcccat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 86  gaagaaagaaaaagaccaatccattctagcggaactgttaatggctccaatgaagcccat 27

                                     
Query: 241 tttgcactgacggaagctactgcaag 266
           ||||||||||||||||||||||||||
Sbjct: 26  tttgcactgacggaagctactgcaag 1