Jatropha Genome Database
- JcCB0058851.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0058851.10 + phase: 0 /pseudo/partial
(804 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c00215 1320 0.0
KJC_c04815 129 1e-29
KJC_c02206 74 6e-13
KJC_c00598 66 1e-10
KJC_c02807 56 1e-07
>KJC_c00215
Length = 1768
Score = 1320 bits (666), Expect = 0.0
Identities = 730/742 (98%), Gaps = 7/742 (0%)
Strand = Plus / Plus
Query: 1 tgcacaactggatgagaaagcccttcttcccttttgcaccccctcaaatgagcgtcattg 60
|||||||||||||||||| ||||||||||||||| ||||||| |||||||||||||||||
Sbjct: 552 tgcacaactggatgagaa-gcccttcttcccttt-gcacccc-tcaaatgagcgtcattg 608
Query: 61 ctcttcagtacagaaaaatgttgtttcggggtaacaaaagagggttctctgatgctatgg 120
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 609 ctcttcagtacagaaaaatgttgtttcggg-taacaaaagagggttctctgatgctatgg 667
Query: 121 atggggttctcagagggcaaatttctttctaatgcagaagtgaatgtgatgctatcaccc 180
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 atggg-ttctcagagggcaaatttctttctaatgcagaagtgaatgtgatgctatcaccc 726
Query: 181 agaccctctccaaacttgggattgaaacctggttctgtgcttgagaactttgggagtcaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 727 agaccctctccaaacttgggattgaaacctggttctgtgcttgagaactttgggagtcaa 786
Query: 241 gcagctaaagtgaaagacactgtcgccccaaaatcaacacaggaaaggcctgatggaaca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 787 gcagctaaagtgaaagacactgtcgccccaaaatcaacacaggaaaggcctgatggaaca 846
Query: 301 aatgagaccagaccgaaccacagtgcttctgcaaataacaacagcagtgcacctgctacc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 847 aatgagaccagaccgaaccacagtgcttctgcaaataacaacagcagtgcacctgctacc 906
Query: 361 aaggcaca-agttg-tgggttggccacctatcagatcgtttaggaagaactctctcgcca 418
|||||||| || | | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 907 aaggcacacaggggataggttggccacctatcagatcgtttaggaagaactctctcgcca 966
Query: 419 ccacatcaaagaacactgaagaggtggatggaaaaggagggcctagtggtttgtttgtaa 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 967 ccacatcaaagaacactgaagaggtggatggaaaaggagggcctagtggtttgtttgtaa 1026
Query: 479 aggttagcatggatggtgctccttacttgaggaaagttgacttgagaaactattctgcat 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1027 aggttagcatggatggtgctccttacttgaggaaagttgacttgagaaactattctgcat 1086
Query: 539 accaggaattatcttctgccctcgagaagatgttcagttgctttacaataggtcaatatg 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1087 accaggaattatcttctgccctcgagaagatgttcagttgctttacaataggtcaatatg 1146
Query: 599 gatctcatggaggtttgggaagagagatgctgagtgagagcaagctgaaggatctgcttc 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1147 gatctcatggaggtttgggaagagagatgctgagtgagagcaagctgaaggatctgcttc 1206
Query: 659 atggctcagaatatgttcttacatatgaggataaagatggtgattggatgcttgttggag 718
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1207 atggctcagaatatgttcttacatatgaggataaagatggtgattggatgcttgttggtg 1266
Query: 719 atgttccatgggaaatgttcat 740
||||||||||||| ||||||||
Sbjct: 1267 atgttccatgggagatgttcat 1288
>KJC_c04815
Length = 845
Score = 129 bits (65), Expect = 1e-29
Identities = 316/397 (79%), Gaps = 2/397 (0%)
Strand = Plus / Plus
Query: 342 cagcagtgcacctgctaccaaggcacaagttgtgggttggccacctatcagatcgtttag 401
|||||||| |||||| | |||||||| ||||| |||||||| || || | || |||||
Sbjct: 323 cagcagtgtccctgctgcgaaggcacaggttgttggttggcctccaattaagtcatttag 382
Query: 402 gaagaactctctcgccaccacatcaaagaacactgaagaggtggatggaaaaggagggcc 461
||||||| | | || ||| | |||||||||| ||| || || ||||||||| ||| |
Sbjct: 383 gaagaacacattagctacctcttcaaagaacaatgatgaagttgatggaaaaccaggtct 442
Query: 462 tagtggtttgtttgtaaaggttagcatggatggtgctccttacttgaggaaagttgactt 521
| ||| | | ||| | ||||| |||||||||||||||||||| || |||||||| || |
Sbjct: 443 tggtgctctttttatcaaggtcagcatggatggtgctccttatttaaggaaagtggatct 502
Query: 522 gagaaactattctgcataccaggaattatcttctgccctcgagaagatgttcagttgctt 581
|||| || || | || || ||| | |||| ||| || ||||||||||||||||| ||
Sbjct: 503 aagaacttactccacttatcaagaactctcttgtgctcttgagaagatgttcagttgttt 562
Query: 582 tacaataggtcaatatggatctcatggaggtt-tgggaagagagatgctgagtgagagca 640
||| |||||||||| |||||||||||||| | ||||||| || | ||||||||||| |
Sbjct: 563 taccataggtcaatgtggatctcatggagctcctgggaag-gaaaagctgagtgagatta 621
Query: 641 agctgaaggatctgcttcatggctcagaatatgttcttacatatgaggataaagatggtg 700
| | | |||||| || |||| ||||| ||||| || ||||| |||||||| ||||| |
Sbjct: 622 aattaagggatcttctgaatggatcagagtatgtgctaacatacgaggataaggatggcg 681
Query: 701 attggatgcttgttggagatgttccatgggaaatgtt 737
|||||||||||||||| ||||| |||||||| |||||
Sbjct: 682 attggatgcttgttggggatgtgccatgggagatgtt 718
>KJC_c02206
Length = 817
Score = 73.8 bits (37), Expect = 6e-13
Identities = 76/89 (85%)
Strand = Plus / Minus
Query: 649 gatctgcttcatggctcagaatatgttcttacatatgaggataaagatggtgattggatg 708
||||| || |||||||| ||||||||||| |||||||| ||||| || ||||| ||||||
Sbjct: 427 gatcttctccatggctctgaatatgttctcacatatgaagataaggacggtgactggatg 368
Query: 709 cttgttggagatgttccatgggaaatgtt 737
||||| || ||||| || ||||| |||||
Sbjct: 367 cttgtcggcgatgtgccctgggagatgtt 339
>KJC_c00598
Length = 889
Score = 65.9 bits (33), Expect = 1e-10
Identities = 84/101 (83%)
Strand = Plus / Minus
Query: 682 tatgaggataaagatggtgattggatgcttgttggagatgttccatgggaaatgttcatg 741
||||| || |||||||| || ||||||||||| |||||||| || ||||||||||| ||
Sbjct: 180 tatgaagacaaagatggagactggatgcttgtaggagatgtgccttgggaaatgtttatc 121
Query: 742 tcatcttgcaaaagattaagaattatgaaaggatcagaagc 782
|| |||||| |||||||||| |||||||| || |||||
Sbjct: 120 gattcatgcaaacgattaagaataatgaaaggctctgaagc 80
>KJC_c02807
Length = 794
Score = 56.0 bits (28), Expect = 1e-07
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 682 tatgaggataaagatggtgattggatgcttgttggagatgttccatgggaaatgtt 737
||||| ||||| |||||||| |||||||| || || |||||||||||||| |||||
Sbjct: 454 tatgaagataaggatggtgactggatgctcgtgggcgatgttccatgggagatgtt 509