Jatropha Genome Database
- JcCB0058681.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0058681.10 + phase: 0
(1104 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c01059 1949 0.0
KJC_c00740 74 8e-13
>KJC_c01059
Length = 1001
Score = 1949 bits (983), Expect = 0.0
Identities = 997/999 (99%), Gaps = 2/999 (0%)
Strand = Plus / Minus
Query: 59 ctagacgttgtgactcctgcaaaacggcacctgctgctgcgttttgccgtgctgactcgg 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 999 ctagacgttgtgactcctgcaaaacggcacctgctgctgcgttttgccgtgctgactcgg 940
Query: 119 cttacctttgccttaactgcgattccaagatccacggcgccaataagctcgtttctagac 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 939 cttacctttgccttaactgcgattccaagatccacggcgccaataagctcgtttctagac 880
Query: 179 acgagcgcgtttggatgtgtgaggtttgtgagcaagcacctgctgccgtcacttgcaaag 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 879 acgagcgcgtttggatgtgtgaggtttgtgagcaagcacctgctgccgtcacttgcaaag 820
Query: 239 ccgacgctgccgctctttgtgtcacgtgcgatgatgatattcactccgctaacccactcg 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 819 ccgacgctgccgctctttgtgtcacgtgcgatgatgatattcactccgctaacccactcg 760
Query: 299 ctcgccggcatgaacgagttccggttgaaccgttcttcgactccgctgactccattgtta 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 759 ctcgccggcatgaacgagttccggttgaaccgttcttcgactccgctgactccattgtta 700
Query: 359 aatcatcgccgtttaattttttagttggtggctccgcggccggataccatcaccaccaac 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 699 aatcatcgccgtttaattttttagttggtggctccgcggccggataccatcaccaccaac 640
Query: 419 aacaagaggatgacatggacagtgtttcgtggctgttaccgaatcctccaagccttaatt 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 639 aacaagaggatgacatggacagtgtttcgtggctgttaccgaatcctccaagccttaatt 580
Query: 479 cgaaactattagggattgaaaatcctgaaatgaagtcttcggatctattttttcctgtaa 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 cgaaactattagggattgaaaatcctgaaatgaagtcttcggatctattttttcctgtaa 520
Query: 539 tggatccatttcttgacatggattttcatcagaaccaccataccgcagctactgacagcg 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 tggatccatttcttgacatggattttcatcagaaccaccataccgcagctactgacagcg 460
Query: 599 tcgttccagtgcaaactaaaccatctccgatgccaattatcaacaacgaaatttgttatg 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 tcgttccagtgcaaactaaaccatctccgatgccaattatcaacaacgaaatttgttatg 400
Query: 659 acgttgatttctgtagatcaaagctttcttccctcaactatccaactcagtctattagcc 718
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 acgttgatttctgtagatcaaagctttcttccctcaactatccaactcagtctattagcc 340
Query: 719 aaagtgtttcttcatcatcggttgatgtaggagttgtaccagatggaaactctatgtccg 778
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 aaagtgtttcttcatcatcggttgatgtaggagttgtaccagatggaaactctatgtccg 280
Query: 779 atatatcttacccttttggccaaaacataaataattctgccggtcccaacgtatctattt 838
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 atatatcttacccttttggccaaaacataaataattctgccggtcccaacgtatctattt 220
Query: 839 cggcaaccgcaagccaagcaagtcaggcgcctgggattgaccgtgaagcgcgggtgttga 898
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 cggcaaccgcaagccaagcaagtcaggcgcctgggattgaccgtgaagcgcgggtgttga 160
Query: 899 ggtatagagagaaaagaaagaaccggaaatttg-aaaagactatacgttacgcttcccg- 956
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 159 ggtatagagagaaaagaaagaaccggaaatttgaaaaagactatacgttacgcttcccga 100
Query: 957 aaaagcttatgccgaaacgagaccaagaatcaaaggccggttcgcgaaacgaacagaaat 1016
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 99 aaaagcttatgccgaaacgagaccaagaatcaaaggccggttcgcgaaacgaacagaaat 40
Query: 1017 tgaatccgatatgaaccatctatatggctctccctcctc 1055
|||||||||||||||||||||||||||||||||||||||
Sbjct: 39 tgaatccgatatgaaccatctatatggctctccctcctc 1
>KJC_c00740
Length = 1040
Score = 73.8 bits (37), Expect = 8e-13
Identities = 103/125 (82%)
Strand = Plus / Minus
Query: 196 tgtgaggtttgtgagcaagcacctgctgccgtcacttgcaaagccgacgctgccgctctt 255
|||||||| || |||||||| || ||| |||||||||||| || |||||||| || ||
Sbjct: 1036 tgtgaggtatgcgagcaagcgccggctcacgtcacttgcaaggctgacgctgcagccctc 977
Query: 256 tgtgtcacgtgcgatgatgatattcactccgctaacccactcgctcgccggcatgaacga 315
|||||||||||||| ||| || |||||||| || ||||| ||||| || || ||||||
Sbjct: 976 tgtgtcacgtgcgaccgtgacatccactccgcgaatccactggctcgacgacacgaacga 917
Query: 316 gttcc 320
|||||
Sbjct: 916 gttcc 912