Jatropha Genome Database
- JcCB0058551.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0058551.20 - phase: 1 /partial
(1679 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c02336 1433 0.0
KJC_c03025 184 5e-46
KJC_c00522 163 2e-39
KJC_s18034 113 1e-24
KJC_c00685 72 5e-12
KJC_c00488 54 1e-06
>KJC_c02336
Length = 967
Score = 1433 bits (723), Expect = 0.0
Identities = 744/747 (99%), Gaps = 3/747 (0%)
Strand = Plus / Minus
Query: 935 ccctgaagtcatctctgtt-ctgaaaa-ctctgtctaatgatcccaataacactgtgttt 992
||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||
Sbjct: 967 ccctgaagtcatctctgttactgaaaaactctgtctaatgatcccaataacactgtgttt 908
Query: 993 attgttagtgggagagggagaagttcattgagtgagtggcttgagccatgtgagagatta 1052
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 907 attgt-agtgggagagggagaagttcattgagtgagtggcttgagccatgtgagagatta 849
Query: 1053 ggaatagctgctgaacatggatacttcacgaggtggaataaaaactctgaatgggtaacc 1112
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 848 ggaatagctgctgaacatggatacttcacgaggtggaataaaaactctgaatgggtaacc 789
Query: 1113 aactctgttgctgatgatcttgattggaaagagattgtagaaccggtaatgagactgtat 1172
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 788 aactctgttgctgatgatcttgattggaaagagattgtagaaccggtaatgagactgtat 729
Query: 1173 acagaagcaaccgatggctccagtatagaggtgaaggacagtgctttagtatggcaccat 1232
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 728 acagaagcaaccgatggctccagtatagaggtgaaggacagtgctttagtatggcaccat 669
Query: 1233 caagatgctgacccagactttggatcctgccaagccaaagaattgttggatcatcttgaa 1292
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 caagatgctgacccagactttggatcctgccaagccaaagaattgttggatcatcttgaa 609
Query: 1293 aatgtccttgcaaatgaaccagctgttgttaagcggggccaacatattgttgaagttaaa 1352
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 aatgtccttgcaaatgaaccagctgttgttaagcggggccaacatattgttgaagttaaa 549
Query: 1353 ccacagggaataagcaaaggacttgttgctgaaaaggttctttcgaatatggttaatcat 1412
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 ccacagggaataagcaaaggacttgttgctgaaaaggttctttcgaatatggttaatcat 489
Query: 1413 gggaagccacctgatttcgtgctgtgcattggtgatgataaatcagatgaggacatgttt 1472
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 gggaagccacctgatttcgtgctgtgcattggtgatgataaatcagatgaggacatgttt 429
Query: 1473 gagagtatattaagcacagtttctggtccaactttgccttcagctccagatatcttcgcc 1532
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 gagagtatattaagcacagtttctggtccaactttgccttcagctccagatatcttcgcc 369
Query: 1533 tgcactgttgggcagaagccaagcaaggctaagtattatcttgacgatactgttgatgtt 1592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 tgcactgttgggcagaagccaagcaaggctaagtattatcttgacgatactgttgatgtt 309
Query: 1593 gtgaaattgcttcaaggccttgcaattgcttcctccccgaagcccaagtatgtggaacaa 1652
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gtgaaattgcttcaaggccttgcaattgcttcctccccgaagcccaagtatgtggaacaa 249
Query: 1653 agtttggtttcttttgagagtgctatt 1679
|||||||||||||||||||||||||||
Sbjct: 248 agtttggtttcttttgagagtgctatt 222
>KJC_c03025
Length = 550
Score = 184 bits (93), Expect = 5e-46
Identities = 315/389 (80%)
Strand = Plus / Plus
Query: 1221 gtatggcaccatcaagatgctgacccagactttggatcctgccaagccaaagaattgttg 1280
|||||||| |||||||||||||| ||||| |||||||| ||||| || || ||| |||||
Sbjct: 22 gtatggcatcatcaagatgctgatccagattttggatcttgccaggcaaaggaactgttg 81
Query: 1281 gatcatcttgaaaatgtccttgcaaatgaaccagctgttgttaagcggggccaacatatt 1340
||||||||||||||||||||||||||||| || | ||||| ||| |||| || || |||
Sbjct: 82 gatcatcttgaaaatgtccttgcaaatgagccggtagttgtcaagaggggtcagcacatt 141
Query: 1341 gttgaagttaaaccacagggaataagcaaaggacttgttgctgaaaaggttctttcgaat 1400
|||||||| || ||||||||| | | ||||| ||||||| || || ||||||||
Sbjct: 142 gttgaagtaaagccacagggagttactaaagggtttgttgcagagaaagttctttctgca 201
Query: 1401 atggttaatcatgggaagccacctgatttcgtgctgtgcattggtgatgataaatcagat 1460
||| | | | ||||||| | || || || || |||||||||| ||||||| |||||||
Sbjct: 202 atgatcagtaatgggaaagccccagactttgtaatgtgcattggggatgatagatcagat 261
Query: 1461 gaggacatgtttgagagtatattaagcacagtttctggtccaactttgccttcagctcca 1520
|| ||||||||||| || |||| ||| |||| |||| || | || || |||||||||
Sbjct: 262 gaagacatgtttgaaagaatatcaagtacagcttctagtttgtcatttccctcagctcca 321
Query: 1521 gatatcttcgcctgcactgttgggcagaagccaagcaaggctaagtattatcttgacgat 1580
|| || ||||| ||||||||||| || ||||||||||| |||| |||||| || || |||
Sbjct: 322 gagattttcgcttgcactgttggccaaaagccaagcaaagctaggtattacctagatgat 381
Query: 1581 actgttgatgttgtgaaattgcttcaagg 1609
||||||||||| || ||||||||||||
Sbjct: 382 actgttgatgtactggcattgcttcaagg 410
>KJC_c00522
Length = 1183
Score = 163 bits (82), Expect = 2e-39
Identities = 89/90 (98%), Gaps = 1/90 (1%)
Strand = Plus / Plus
Query: 1 tgcctgtaggtatacacatgggtcgacttgaatcggtcatgaatattcc-atccacatct 59
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 1094 tgcctgtaggtatacacatgggtcgacttgaatcggtcatgaatattccgatccacatct 1153
Query: 60 gctaaagtccaagaaattcaaaaactgttt 89
||||||||||||||||||||||||||||||
Sbjct: 1154 gctaaagtccaagaaattcaaaaactgttt 1183
>KJC_s18034
Length = 127
Score = 113 bits (57), Expect = 1e-24
Identities = 81/89 (91%)
Strand = Plus / Minus
Query: 1221 gtatggcaccatcaagatgctgacccagactttggatcctgccaagccaaagaattgttg 1280
|||||||| |||||||||||||| ||||| |||||||| ||||| || || ||| |||||
Sbjct: 107 gtatggcatcatcaagatgctgatccagattttggatcttgccaggcaaaggaactgttg 48
Query: 1281 gatcatcttgaaaatgtccttgcaaatga 1309
|||||||||||||||||||||||||||||
Sbjct: 47 gatcatcttgaaaatgtccttgcaaatga 19
>KJC_c00685
Length = 3018
Score = 71.9 bits (36), Expect = 5e-12
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 639 tctgagaagcaattgcgccatgagaagcattaccgttatgtcagcactcacgatgt 694
|||||||||||||||||||||||||| |||||| | ||||||||||| || |||||
Sbjct: 1295 tctgagaagcaattgcgccatgagaaacattacaggtatgtcagcacccatgatgt 1240
>KJC_c00488
Length = 2467
Score = 54.0 bits (27), Expect = 1e-06
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 405 aatgcagtcagggatgggatgaatttggttccttacaaatatatcgtttgtaggcaggg 463
|||||||| || |||||||||||||||||| |||| || |||| |||||||| |||||
Sbjct: 1457 aatgcagttagagatgggatgaatttggtttcttataagtatactgtttgtagacaggg 1515