Jatropha Genome Database

JcCB0058211.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0058211.10 - phase: 0 
         (1779 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c10774                                                            989   0.0  

>KJC_c10774 
          Length = 537

 Score =  989 bits (499), Expect = 0.0
 Identities = 534/539 (99%), Gaps = 5/539 (0%)
 Strand = Plus / Minus

                                                                       
Query: 106 ggccttggcattcatatggacttgcaaaatttctttccatcaaaatataacataccatta 165
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 537 ggccttggcattcatatggacttgcaaaatttctttccatcaaa-tataacataccatta 479

                                                                       
Query: 166 cccgtagcttctgaagctgagaatgttaattaccgacttaagctactcaaagaagcgtca 225
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 cccgtagcttctgaagctgagaatgttaattaccgacttaagctactcaaagaagcgtca 419

                                                                       
Query: 226 aaaagtcagcagaaagaaaaagatggccctttgtttacccccttgactctgccctatata 285
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 aaaagtcagcagaa-gaaaaagatggccctttgtttacccccttgactctgccctatata 360

                                                                       
Query: 286 aatctacccactgatcacccgtcatctttatctgtcacttctgtgaccacggatttgggg 345
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 aatctacccactgatcacccgtcatctttatctgtcacttctgtgaccacggatttgggg 300

                                                                       
Query: 346 ttaggaacactctatgcatcaagttctcaaaaaccaaacaagtcaaaattaagcgattat 405
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 ttaggaacactctatgcatcaagttctcaaaaaccaaacaagtcaaaattaagcgattat 240

                                                                       
Query: 406 aaagagcattttcagcaccttacaggttttaattcttctgggtttggagctagtgagagt 465
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 aaagagcattttcagcaccttacaggttttaattcttctgggtttggagctagtgagagt 180

                                                                       
Query: 466 acacataaaatcaaactatcttcttcatgttctaatccttctgttggaggccatttggat 525
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 179 acacataaaatcaaactatcttcttcatgttctaatccttctgttggaggccatttggat 120

                                                                       
Query: 526 ttaagagattacaaatcaatcagagaagctc-ttctt-aaaagagttgggtggcaagaag 583
           ||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 119 ttaagagattacaaatcaatcagagaagctctttcttaaaaagagttgggtggcaagaag 60

                                                                      
Query: 584 aagccataagtgctattagtcaagccatatgtcaatgtaaggcaggatat-ggaagaaa 641
           |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 59  aagccataagtgctattagtcaagccatatgtcaatgtaaggcaggatataggaagaaa 1