Jatropha Genome Database

JcCB0058191.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0058191.20 - phase: 0 /partial/short
         (147 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c04944                                                            291   2e-79
KJC_s20690                                                            111   4e-25

>KJC_c04944 
          Length = 711

 Score =  291 bits (147), Expect = 2e-79
 Identities = 147/147 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   ggaattgcagttgcaataaaatctggagctacaaaggctcagtttgacagcacggtcgga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 222 ggaattgcagttgcaataaaatctggagctacaaaggctcagtttgacagcacggtcgga 163

                                                                       
Query: 61  atacacccttctgctgccgaggaatttgtgaccatgcggtcattgtcgaggcgtgttact 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 162 atacacccttctgctgccgaggaatttgtgaccatgcggtcattgtcgaggcgtgttact 103

                                      
Query: 121 gccggtaacaagccaaagacgaatcta 147
           |||||||||||||||||||||||||||
Sbjct: 102 gccggtaacaagccaaagacgaatcta 76


>KJC_s20690 
          Length = 273

 Score =  111 bits (56), Expect = 4e-25
 Identities = 56/56 (100%)
 Strand = Plus / Minus

                                                                   
Query: 1   ggaattgcagttgcaataaaatctggagctacaaaggctcagtttgacagcacggt 56
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 114 ggaattgcagttgcaataaaatctggagctacaaaggctcagtttgacagcacggt 59