Jatropha Genome Database
- JcCB0057761.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0057761.20 + phase: 0
(1128 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c05890 1443 0.0
>KJC_c05890
Length = 825
Score = 1443 bits (728), Expect = 0.0
Identities = 763/768 (99%), Gaps = 5/768 (0%)
Strand = Plus / Minus
Query: 1 atggcgccttttccatctatttt-cgatggatttgctagaacagtgtcaataaagaaagg 59
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 765 atggcgccttttccatctatttttcgatggatttgctagaacagtgtcaataaagaaagg 706
Query: 60 aagaaacgcccaaaaa-gacgttggaaaagaagcagcagattctttggctaaggatgcaa 118
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 705 aagaaacgcccaaaaaagacgttggaaaagaagcagcagattctttggctaaggatgcaa 646
Query: 119 agaagaatgagttgatgttgagttgctcaggcattgtcaagtccaacaagtcaaataatt 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 agaagaatgagttgatgttgagttgctcaggcattgtcaagtccaacaagtcaaataatt 586
Query: 179 tcgcctcagtttgctccaaaagaggccaaaaaggaattaatcaagattgcttgattgtgt 238
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 585 tcgcctcagtttgctccaaaagaggccaaaaagga-ttaatcaagattgcttgattgtgt 527
Query: 239 gggaggaatttggatgccaagaggacatgatcttctgtgggatttttgatgggcatggac 298
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 gg-aggaatttggatgccaagaggacatgatcttctgtgggatttttgatgggcatggac 468
Query: 299 catggggacatgttgtttcaaaaagagtgagagaatctgtcccttcttctttgctatgca 358
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 467 catggggacatgttgtttcaaaa-gagtgagagaatctgtcccttcttctttgctatgca 409
Query: 359 attggcaggaaactcttgcattgacatcaatcgacaaggatttcgaaatggaattggata 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 attggcaggaaactcttgcattgacatcaatcgacaaggatttcgaaatggaattggata 349
Query: 419 gagacctccatcaatttgatgtttggaagcaagcctacttgaaaacttatgctgtcattg 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 gagacctccatcaatttgatgtttggaagcaagcctacttgaaaacttatgctgtcattg 289
Query: 479 accaggaacttaagcagaatcctgggattgatgccttttgcagtggaactacaggtttaa 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 accaggaacttaagcagaatcctgggattgatgccttttgcagtggaactacaggtttaa 229
Query: 539 caatcgtcaaacagggtgaacatcttgttatagcgaacgttggcgattctcgggctgtat 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 228 caatcgtcaaacagggtgaacatcttgttatagcgaacgttggcgattctcgggctgtat 169
Query: 599 tagcgacgacttctgaggatggaagtttggtgccacttcagcttaccattgatttcaaac 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 168 tagcgacgacttctgaggatggaagtttggtgccacttcagcttaccattgatttcaaac 109
Query: 659 ctaatttaccccaggaggctgaacgaattacacagtcaaaaggtcgagtgttctgtttac 718
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 108 ctaatttaccccaggaggctgaacgaattacacagtcaaaaggtcgagtgttctgtttac 49
Query: 719 cggatgagccgggggtttatagggtctggatgcctaatggaaaaagac 766
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 48 cggatgagccgggggtttatagggtctggatgcctaatggaaaaagac 1