Jatropha Genome Database
- JcCB0052901.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0052901.10 + phase: 0 /pseudo/partial
(886 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c11935 1178 0.0
>KJC_c11935
Length = 780
Score = 1178 bits (594), Expect = 0.0
Identities = 611/614 (99%), Gaps = 2/614 (0%)
Strand = Plus / Minus
Query: 143 ctgaagtggaagatgtcatctcgatgagtttgacagctgtttcttcactccttgagaagt 202
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 780 ctgaagtggaagatgtcatctcgatgagtttgacagctgtttcttcactccttgagaagt 721
Query: 203 ataatattgatcctaaacaaattggtcgtctggaagttggcagtgaaactgtgattgaca 262
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 ataatattgatcctaaacaaattggtcgtctggaagttggcagtgaaactgtgattgaca 661
Query: 263 agagcaaatctatcaagaccttcttgatgcaaatttttgagaaatatggaaacactgatg 322
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 agagcaaatctatcaagaccttcttgatgcaaatttttgagaaatatggaaacactgatg 601
Query: 323 ttgaaggtgttgactcaactaatgcctgttatggggggacagcagctttactcaactgtg 382
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 ttgaaggtgttgactcaactaatgcctgttatggggggacagcagctttactcaactgtg 541
Query: 383 tcaactgggttgagagcaactcatgggatggacgctacggacttgtagtgtgtactgaca 442
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 tcaactgggttgagagcaactcatgggatggacgctacggacttgtagtgtgtactgaca 481
Query: 443 gtgcggtctatgcagaaggtccagcccgacctactggaggagctgcagccattgcaattc 502
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 gtgcggtctatgcagaaggtccagcccgacctactggaggagctgcagccattgcaattc 421
Query: 503 taataggtccagatgcacctattgcttttgaaagcaaatttagggggagccatatgtctc 562
|||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||
Sbjct: 420 taataggtccagatgcacctattgctttggaaagcaaatttagggggag-catatgtctc 362
Query: 563 acacttatgatttttacaagcccaacctggctagtgaatacccggttgtggatggcaagc 622
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 acacttatga-ttttacaagcccaacctggctagtgaatacccggttgtggatggcaagc 303
Query: 623 tttctcaaacgtgctacctcatggctcttgattcctgctacaaaaatttttgtgccaagt 682
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 tttctcaaacgtgctacctcatggctcttgattcctgctacaaaaatttttgtgccaagt 243
Query: 683 atgagaaattcaagggcaaacaattctctatatctgatgctgaatattttgtatttcatt 742
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 atgagaaattcaagggcaaacaattctctatatctgatgctgaatattttgtatttcatt 183
Query: 743 ctccttataacaag 756
||||||||||||||
Sbjct: 182 ctccttataacaag 169