Jatropha Genome Database
- JcCB0050881.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0050881.10 + phase: 0 /pseudo/partial
(831 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c02065 1398 0.0
>KJC_c02065
Length = 949
Score = 1398 bits (705), Expect = 0.0
Identities = 726/734 (98%), Gaps = 1/734 (0%)
Strand = Plus / Minus
Query: 90 ccttaattacaagaagagtctcaaggattattgtgatgggaattcattaactgtagtttt 149
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 905 ccttaattacaagaagagtctcaaggattattgtgatgggaattcattaactgtagttt- 847
Query: 150 aaaggacctgggtccacaagtttcctatcgcacccnnnnnnnctgggagtacttgggtcc 209
||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 846 aaaggacctgggtccacaagtttcctatcgcaccctttttttctgggagtacttgggtcc 787
Query: 210 tttggtcctttatcctgtcttttacttctttcctgtttaccagtactttggctacaaggg 269
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 786 tttggtcctttatcctgtcttttacttctttcctgtttaccagtactttggctacaaggg 727
Query: 270 ggaacgcgtgatccaaccagttcagacatatgctttattgtattggtgcttccactactt 329
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 726 ggaacgcgtgatccaaccagttcagacatatgctttattgtattggtgcttccactactt 667
Query: 330 caaacgcatcatggaaacattttttgtgcaccgatttagccatgcaacttcaccactgtc 389
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 666 caaacgcatcatggaaacattttttgtgcaccgatttagccatgcaacttcaccactgtc 607
Query: 390 caatgtgttccgaaattgtgcttattactggacatttggttgctatattgcttactatgt 449
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 caatgtgttccgaaattgtgcttattactggacatttggttgctatattgcttactatgt 547
Query: 450 gaaccacccactttacactcctgttagcgatcttcaatggaagattggatttgggtttgg 509
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 gaaccacccactttacactcctgttagcgatcttcaatggaagattggatttgggtttgg 487
Query: 510 tttgatttgtcaagttgcaaacttttattgccacatcttgctaaaaaatcttcgcagtcc 569
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 tttgatttgtcaagttgcaaacttttattgccacatcttgctaaaaaatcttcgcagtcc 427
Query: 570 agatgggggtggagggtatcaaatcccacgtggatttctctttgatattgtgacctgtgc 629
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 agatgggggtggagggtatcaaatcccacgtggatttctctttgatattgtgacctgtgc 367
Query: 630 aaattacacaacagagatctatcagtggttgggtttcaatattgcaacacagactgttgc 689
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 aaattacacaacagagatctatcagtggttgggtttcaatattgcaacacagactgttgc 307
Query: 690 aggctacatctttcttgtggttgctgctatgatcatgaccaattgggcccttgcaaagca 749
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 aggctacatctttcttgtggttgctgctatgatcatgaccaattgggcccttgcaaagca 247
Query: 750 ccgccgattgaagaagctatttgatgggaaggatggaagacctaaatatccacgccgatg 809
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 ccgccgattgaagaagctatttgatgggaaggatggaagacctaaatatccacgccgatg 187
Query: 810 ggttatactgcccc 823
||||||||||||||
Sbjct: 186 ggttatactgcccc 173