Jatropha Genome Database
- JcCB0050531.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0050531.10 + phase: 0 /partial
(1068 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c01918 1582 0.0
>KJC_c01918
Length = 1995
Score = 1582 bits (798), Expect = 0.0
Identities = 812/814 (99%), Gaps = 2/814 (0%)
Strand = Plus / Minus
Query: 1 aaaaatcaacatgaaaaagaa-gaagagccggttgctggaaagactccagtgctagagtt 59
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 815 aaaaatcaacatgaaaaagaaagaagagccggttgctggaaagactccagtgctagagtt 756
Query: 60 ggagggtgaggttgagaaactgaaacagcaaatttcaaaagccaaggaatcatcaagcaa 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 755 ggagggtgaggttgagaaactgaaacagcaaatttcaaaagccaaggaatcatcaagcaa 696
Query: 120 gcctccggagttggctttaaatgagatgattgaaaaacttaaaagagagattgaccttga 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 695 gcctccggagttggctttaaatgagatgattgaaaaacttaaaagagagattgaccttga 636
Query: 180 attttctgaagccgttaaagccatgggctttaaggacaggtttgcgaccttgcgagaaga 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 635 attttctgaagccgttaaagccatgggctttaaggacaggtttgcgaccttgcgagaaga 576
Query: 240 gtttctgaaagcaaattcacaggaccaacttatgcatccaggtctaatggacaaaattga 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 gtttctgaaagcaaattcacaggaccaacttatgcatccaggtctaatggacaaaattga 516
Query: 300 aaaacttaagaatgaatttactcaaggcctctctgcagctcctaactttccaagtctgaa 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 aaaacttaagaatgaatttactcaaggcctctctgcagctcctaactttccaagtctgaa 456
Query: 360 gtacaaacttgatatgttgaaggagttttctaaagccaagaacatctcagaaaagaatag 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 gtacaaacttgatatgttgaaggagttttctaaagccaagaacatctcagaaaagaatag 396
Query: 420 taaaggtttgacattgaagcaggaaatcaataagaaacttaaagaggtcatggatcaacc 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 taaaggtttgacattgaagcaggaaatcaataagaaacttaaagaggtcatggatcaacc 336
Query: 480 tgatatgaaggaaaaaatggaagcattagaggctgaagttctaagatcaggagcttacaa 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 tgatatgaaggaaaaaatggaagcattagaggctgaagttctaagatcaggagcttacaa 276
Query: 540 tgaaggggaattagatgaagagacgagggagagaattatgagtatgagaagggagataga 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 tgaaggggaattagatgaagagacgagggagagaattatgagtatgagaagggagataga 216
Query: 600 gttggaactggcaaatgttttcaagtccttgggtttggaggttgagattgtgaagtcaaa 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 gttggaactggcaaatgttttcaagtccttgggtttggaggttgagattgtgaagtcaaa 156
Query: 660 agcaaaagaacttggtgagcagactccattgctagacttcaaggctaaggtgg-aaaatt 718
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 155 agcaaaagaacttggtgagcagactccattgctagacttcaaggctaaggtggaaaaatt 96
Query: 719 tgaaggaacaaactaacaagaaaattgaaggtctaataaattcatcagatcttaaaaaca 778
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95 tgaaggaacaaactaacaagaaaattgaaggtctaataaattcatcagatcttaaaaaca 36
Query: 779 tgattgagttgctgaagttggaggtagcaaaggc 812
||||||||||||||||||||||||||||||||||
Sbjct: 35 tgattgagttgctgaagttggaggtagcaaaggc 2