Jatropha Genome Database

JcCB0047491.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0047491.10 + phase: 0 /partial
         (459 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c10946                                                            799   0.0  

>KJC_c10946 
          Length = 571

 Score =  799 bits (403), Expect = 0.0
 Identities = 433/438 (98%), Gaps = 4/438 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   ttaagggagcatttggagaaagctgggtgtggagttgaggaaaatttgatcaaggccatt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 138 ttaagggagcatttggagaaagctgggtgtggagttgaggaaaatttgatcaaggccatt 197

                                                                       
Query: 61  aattgtgattcaaaaatcagtggtggttatatttccggcaaagggataatagtgtgtagc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 aattgtgattcaaaaatcagtggtggttatatttccggcaaagggataatagtgtgtagc 257

                                                                       
Query: 121 aatcatatgaacattcaagatgaggtcaaccaagtggttatacatgaactgattcacgct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 aatcatatgaacattcaagatgaggtcaaccaagtggttatacatgaactgattcacgct 317

                                                                       
Query: 181 tatgatgattgtcgtgctaaaaacttggactgggctaattgtgctcatcatgcctgtagt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 tatgatgattgtcgtgctaaaaacttggactgggctaattgtgctcatcatgcctgtagt 377

                                                                       
Query: 241 gagattcgtgctagtcatttaagcggtgattgccactataaaagggaactgctgcggggt 300
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 378 gagattcgtgctagtcatttaagcggtgattgccactataaaaggg-actgctgcggggt 436

                                                                       
Query: 301 tacatgaaaatgagaggtcatggacaagaatgcgtgaaaagaagagcaatgaaatcagtg 360
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 437 tacatgaaaatgagaggtcatggacaagaatgcgtgaaaag-agagcaatgaaatcagtg 495

                                                                       
Query: 361 attgctaacccatactgctctgaagctgctgcaaaggatgctgtggaagctgtctgggat 420
           |||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 496 attgctaa-ccatactgctctgaagctgctgcaaaggntgctgtggaagctgtctgggat 554

                             
Query: 421 gtctgttataatgatacg 438
           ||||| ||||||||||||
Sbjct: 555 gtctg-tataatgatacg 571