Jatropha Genome Database
- JcCB0044721.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0044721.10 - phase: 0
(915 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c00283 979 0.0
KJC_s18220 468 e-131
KJC_c14166 258 2e-68
KJC_s16148 202 1e-51
>KJC_c00283
Length = 1179
Score = 979 bits (494), Expect = 0.0
Identities = 494/494 (100%)
Strand = Plus / Minus
Query: 1 atggacatgcattgcgagggctgtgctaagaaagttagacgtgccgttaaacatttggaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1012 atggacatgcattgcgagggctgtgctaagaaagttagacgtgccgttaaacatttggaa 953
Query: 61 ggtgtggaaactgtgaaaacagattgtgagggcaacaaattgacggtgaccgggaaagta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 952 ggtgtggaaactgtgaaaacagattgtgagggcaacaaattgacggtgaccgggaaagta 893
Query: 121 gacccggagaaagtcaaggcgaggttggaggagaaaacaaagaagaaagtggagattgtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 892 gacccggagaaagtcaaggcgaggttggaggagaaaacaaagaagaaagtggagattgtg 833
Query: 181 tctgctccaccgaagaaagacggtggcggtgataagaaacctgaagagaaatcggacaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 832 tctgctccaccgaagaaagacggtggcggtgataagaaacctgaagagaaatcggacaaa 773
Query: 241 aaaccggaggagaaaaagcctgaagagaagaaaccgtctcctcctaaagagagtacggtc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 772 aaaccggaggagaaaaagcctgaagagaagaaaccgtctcctcctaaagagagtacggtc 713
Query: 301 gttttgaagatcagaacccactgtgatggttgcattacaaaaatgaagaagatcatcttg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712 gttttgaagatcagaacccactgtgatggttgcattacaaaaatgaagaagatcatcttg 653
Query: 361 aaaatcaaaggcgttaagaacgtgacggtggacggagctaaggacttggtgacggtaaca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652 aaaatcaaaggcgttaagaacgtgacggtggacggagctaaggacttggtgacggtaaca 593
Query: 421 ggaacaatggacgtgaaggaattggcgccttatctaacggagaagctgaagaggaacgtg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 ggaacaatggacgtgaaggaattggcgccttatctaacggagaagctgaagaggaacgtg 533
Query: 481 gaggttgttccgcc 494
||||||||||||||
Sbjct: 532 gaggttgttccgcc 519
Score = 591 bits (298), Expect = e-168
Identities = 298/298 (100%)
Strand = Plus / Minus
Query: 618 cggaggcgctgcacctaagatggaggtgagcaagatggagtactatccagcaccggcacc 677
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 cggaggcgctgcacctaagatggaggtgagcaagatggagtactatccagcaccggcacc 336
Query: 678 gactcactggttcgatggaatgtttggtcaaagttacgccgtggagcctcatcacgggtc 737
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 gactcactggttcgatggaatgtttggtcaaagttacgccgtggagcctcatcacgggtc 276
Query: 738 ttacgcggtaaatcaaggctattaccctgtaaatcaagggtacccgatgatgaaccatgg 797
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 ttacgcggtaaatcaaggctattaccctgtaaatcaagggtacccgatgatgaaccatgg 216
Query: 798 gtacgtacaacaaggatatgtacaacaggggtatgtgatggaaccaatgtacaaccatcc 857
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 gtacgtacaacaaggatatgtacaacaggggtatgtgatggaaccaatgtacaaccatcc 156
Query: 858 aatgcatgctccgcagatgttcagcgacgagaatcccaactcttgttccgtgatgtga 915
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 aatgcatgctccgcagatgttcagcgacgagaatcccaactcttgttccgtgatgtga 98
>KJC_s18220
Length = 473
Score = 468 bits (236), Expect = e-131
Identities = 243/244 (99%), Gaps = 1/244 (0%)
Strand = Plus / Plus
Query: 1 atggacatgcattgcgagggctgtgctaagaaagttagacgtgccgttaaacatttggaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 140 atggacatgcattgcgagggctgtgctaagaaagttagacgtgccgttaaacatttggaa 199
Query: 61 ggtgtggaaactgtgaaaacagattgtgagggcaacaaattgacggtgaccgggaaagta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 ggtgtggaaactgtgaaaacagattgtgagggcaacaaattgacggtgaccgggaaagta 259
Query: 121 gacccggagaaagtcaaggcgaggttggaggagaaaacaaagaagaaagtggagattgtg 180
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 260 gacccggagaaagtcaaggcgaggttggaggagaaaac-aagaagaaagtggagattgtg 318
Query: 181 tctgctccaccgaagaaagacggtggcggtgataagaaacctgaagagaaatcggacaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 tctgctccaccgaagaaagacggtggcggtgataagaaacctgaagagaaatcggacaaa 378
Query: 241 aaac 244
||||
Sbjct: 379 aaac 382
>KJC_c14166
Length = 793
Score = 258 bits (130), Expect = 2e-68
Identities = 144/146 (98%), Gaps = 2/146 (1%)
Strand = Plus / Minus
Query: 772 caagggtacccgatgatgaaccatgggta-cgtacaacaaggatatgtacaacaggggta 830
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 791 caagggtacccgatgatgaaccatgggtaacgtacaacaaggatatgtacaacaggggta 732
Query: 831 tgtgatggaaccaatgta-caaccatccaatgcatgctccgcagatgttcagcgacgaga 889
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 tgtgatggaaccaatgtaacaaccatccaatgcatgctccgcagatgttcagcgacgaga 672
Query: 890 atcccaactcttgttccgtgatgtga 915
||||||||||||||||||||||||||
Sbjct: 671 atcccaactcttgttccgtgatgtga 646
>KJC_s16148
Length = 356
Score = 202 bits (102), Expect = 1e-51
Identities = 109/110 (99%), Gaps = 1/110 (0%)
Strand = Plus / Plus
Query: 153 gaaaacaaagaagaaagtggagattgtgtctgctccaccgaagaaagacggtggcggtga 212
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gaaaacaaagaagaaagtggagattgtgtctgctccaccgaagaaagacggtggcggtga 60
Query: 213 taagaaacctgaagagaaatcggac-aaaaaaccggaggagaaaaagcct 261
||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 61 taagaaacctgaagagaaatcggacaaaaaaaccggaggagaaaaagcct 110