Jatropha Genome Database

JcCB0044401.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0044401.10 + phase: 0 /partial/short
         (129 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c00344                                                            256   1e-68

>KJC_c00344 
          Length = 1503

 Score =  256 bits (129), Expect = 1e-68
 Identities = 129/129 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   aaagtattgcagatgcttcgcgaggagtttgagctaacaatggcattaagtggttgccgt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 aaagtattgcagatgcttcgcgaggagtttgagctaacaatggcattaagtggttgccgt 347

                                                                       
Query: 61  tcactcagggagatcacccgtaaccacatcgtggccgactgggaccttcctcgccctgtt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 tcactcagggagatcacccgtaaccacatcgtggccgactgggaccttcctcgccctgtt 287

                    
Query: 121 cccaggtta 129
           |||||||||
Sbjct: 286 cccaggtta 278