Jatropha Genome Database
- JcCB0044181.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0044181.20 + phase: 0 /pseudo/partial
(701 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c03613 618 e-177
KJC_c03734 272 1e-72
KJC_s19651 161 3e-39
>KJC_c03613
Length = 527
Score = 618 bits (312), Expect = e-177
Identities = 333/336 (99%), Gaps = 3/336 (0%)
Strand = Plus / Plus
Query: 1 atgtctctacgagttttgaaccctaatgcggaggttcttaacaaatcggcggcgcttcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 170 atgtctctacgagttttgaaccctaatgcggaggttcttaacaaatcggcggcgcttcat 229
Query: 61 atgaatatcaatgccgcgaagggcttacaggacgtcctcaagaccaatctcggccctaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230 atgaatatcaatgccgcgaagggcttacaggacgtcctcaagaccaatctcggccctaaa 289
Query: 121 ggcaccatcaagatgcttgttggtggagccggagatatcaagcttactaaggacggcaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 ggcaccatcaagatgcttgttggtggagccggagatatcaagcttactaaggacggcaac 349
Query: 181 actctcttgaaagaaatgcaaattcaaaaccctactgcaattatgattgcaaggacagct 240
||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 actctcttgaaag-aatgc-aattcaaaaccctactgcaattatgattgcaaggacagct 407
Query: 241 gttgcccaagatgatataagtggagatggtactacatctactgtgattttcattggagag 300
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 408 gttgcccaagatgatataagtggagatggtactacatctactgtga-tttcattggagag 466
Query: 301 cttatgaaacagtcggaacggtacatcgatgaaggt 336
||||||||||||||||||||||||||||||||||||
Sbjct: 467 cttatgaaacagtcggaacggtacatcgatgaaggt 502
>KJC_c03734
Length = 615
Score = 272 bits (137), Expect = 1e-72
Identities = 159/164 (96%), Gaps = 3/164 (1%)
Strand = Plus / Minus
Query: 427 aaaagagctacactccagtttcttgaaaaattcaagactcccgtgattatgggtgatgaa 486
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 615 aaaagagctacactccagtttcttgaaaaatacaagactcccgtgattatgggtgatgaa 556
Query: 487 cctgacaaagag--attctaaaaat-ggtagcaagaacaacattgagaacaaagctatat 543
||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 555 cctgacaaagaagaattctaaaaataggtagcaagaacaacattgagaacaaagctatat 496
Query: 544 gaagcattggcagatcaattaactgatatagttgttaatgcggt 587
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 gaagcattggcagatcaattaactgatatagttgttaatgcggt 452
>KJC_s19651
Length = 479
Score = 161 bits (81), Expect = 3e-39
Identities = 98/101 (97%), Gaps = 2/101 (1%)
Strand = Plus / Plus
Query: 3 gtctctacgagtttt-gaaccctaatgcggaggttcttaacaaatcggcggcgcttcata 61
||||||||||||||| |||||||||||||||||||||| ||||||||||| |||||||||
Sbjct: 380 gtctctacgagtttttgaaccctaatgcggaggttctttacaaatcggcg-cgcttcata 438
Query: 62 tgaatatcaatgccgcgaagggcttacaggacgtcctcaag 102
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 tgaatatcaatgccgcgaagggcttacaggacgtcctcaag 479