Jatropha Genome Database
- JcCB0041981.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0041981.10 + phase: 0 /partial
(969 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c02380 1259 0.0
>KJC_c02380
Length = 676
Score = 1259 bits (635), Expect = 0.0
Identities = 662/667 (99%), Gaps = 3/667 (0%)
Strand = Plus / Minus
Query: 88 tctgagattgccaaggacctcaatcttagtcccaaccattatgatctctatggaaaatac 147
|||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||
Sbjct: 676 tctgagattgccaaggac-tcaatcttagtcc-aaccattatgatctctatggaaaatac 619
Query: 148 aaagccaaggtgttattgtctgctcttgatgagcttgaaggatcaccagatgggtactat 207
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 aaagccaaggtgttattgtctgctcttgatgagcttgaaggatcaccagatgggtactat 559
Query: 208 gtggttgttggagggattacgcctacaccacttggggaaggcaaatcaactactacggtt 267
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 gtggttgttg-agggattacgcctacaccacttggggaaggcaaatcaactactacggtt 500
Query: 268 gggctttgtcaagctttgggagcatttcttgataaaaaggttgtcacctgccttcgccaa 327
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 gggctttgtcaagctttgggagcatttcttgataaaaaggttgtcacctgccttcgccaa 440
Query: 328 ccatcacaaggacctacttttggaattaaagggggtgcagcaggtggtggttatagtcag 387
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 ccatcacaaggacctacttttggaattaaagggggtgcagcaggtggtggttatagtcag 380
Query: 388 gtgattccaatggacgaattcaatcttcacctaacgggggatatccatgcaataacagct 447
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 gtgattccaatggacgaattcaatcttcacctaacgggggatatccatgcaataacagct 320
Query: 448 gcaaacaatctccttgcagctgctattgatactcgaattttccatgagtcatctcaatct 507
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 gcaaacaatctccttgcagctgctattgatactcgaattttccatgagtcatctcaatct 260
Query: 508 gataaagctcttttcaaccgattatgcctacctaacaaagaaggaaaaagaacctttagt 567
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 gataaagctcttttcaaccgattatgcctacctaacaaagaaggaaaaagaacctttagt 200
Query: 568 gatataatgtttaggcgtttgaagaagcttggtatctccaagactaaaccagaggaactc 627
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 gatataatgtttaggcgtttgaagaagcttggtatctccaagactaaaccagaggaactc 140
Query: 628 actgcacaagaaattaagaagtttgctagacttgatatagatccaaattcaattacatgg 687
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139 actgcacaagaaattaagaagtttgctagacttgatatagatccaaattcaattacatgg 80
Query: 688 aggagagttatggatgtcaatgaccgattcttgaggaagattactgttggtcaaggtcct 747
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 79 aggagagttatggatgtcaatgaccgattcttgaggaagattactgttggctaaggtcct 20
Query: 748 gaagaaa 754
|||||||
Sbjct: 19 gaagaaa 13