Jatropha Genome Database
- JcCB0039521.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0039521.10 + phase: 0
(924 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c04945 1037 0.0
KJC_c05811 664 0.0
>KJC_c04945
Length = 616
Score = 1037 bits (523), Expect = 0.0
Identities = 530/531 (99%), Gaps = 1/531 (0%)
Strand = Plus / Plus
Query: 394 ttctaccttgctcttggtggatccttactttcgtacatatactctgctcctcctctaaag 453
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttctaccttgctcttggtggatccttactttcgtacatatactctgctcctcctctaaag 60
Query: 454 ctgaaacaaaatggttggatcggaaattttgccctgggagcaagctatatcagtttgcca 513
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctgaaacaaaatggttggatcggaaattttgccctgggagcaagctatatcagtttgcca 120
Query: 514 tggtgggccggtcaagctttgtttgggacccttacaccagacataattgttctaactctc 573
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tggtgggccggtcaagctttgtttgggacccttacaccagacataattgttctaactctc 180
Query: 574 ttgtacagcatagctgggctaggaattgccatcgtaaatgactttaaaagtattgaaggg 633
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttgtacagcatagctgggctaggaattgccatcgtaaatgactttaaaagtattgaaggg 240
Query: 634 gatagagcattgggtcttcagtcacttccagtagcttttggtgctgaaactgctaaatgg 693
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 -atagagcattgggtcttcagtcacttccagtagcttttggtgctgaaactgctaaatgg 299
Query: 694 atatgtgttggtgcgattgacataactcagatctctatcgccggctatctgctaggggct 753
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 atatgtgttggtgcgattgacataactcagatctctatcgccggctatctgctaggggct 359
Query: 754 ggtaaaccttattatgctctcgccctgcttgctttgatacttccacaggtctttttccag 813
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 ggtaaaccttattatgctctcgccctgcttgctttgatacttccacaggtctttttccag 419
Query: 814 ttccaatattttctcaaggaccctgccaagtatgacgttaaatatcaggctagtgctcaa 873
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 ttccaatattttctcaaggaccctgccaagtatgacgttaaatatcaggctagtgctcaa 479
Query: 874 ccatttcttgtgctgggtttattggtaactgctctagcgacaagtcactaa 924
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 ccatttcttgtgctgggtttattggtaactgctctagcgacaagtcactaa 530
>KJC_c05811
Length = 525
Score = 664 bits (335), Expect = 0.0
Identities = 342/343 (99%), Gaps = 1/343 (0%)
Strand = Plus / Plus
Query: 43 aacacatggaagatccgtcttcaacttacaaaacctgttacttggcctccattggtctgg 102
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 aacacatggaagatccgtcttcaacttacaaaacctgttacttggcctccattggtctgg 243
Query: 103 ggtgtagtttgtggagctgctgcttcgggaaacttccattggaatttggaagatgttgca 162
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 g-tgtagtttgtggagctgctgcttcgggaaacttccattggaatttggaagatgttgca 302
Query: 163 aaatcaattgtttgcatgttgatgtctggtccatttctgactggttacacacagacactg 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 aaatcaattgtttgcatgttgatgtctggtccatttctgactggttacacacagacactg 362
Query: 223 aatgattattatgaccgtgaaatcgatgctattaatgaaccttatcgcccaattccgtct 282
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 aatgattattatgaccgtgaaatcgatgctattaatgaaccttatcgcccaattccgtct 422
Query: 283 ggggctatttctgagaatgaggtcattactcaaatctgggtactgcttctaggagggctc 342
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 ggggctatttctgagaatgaggtcattactcaaatctgggtactgcttctaggagggctc 482
Query: 343 ggcttgagtggtttattggatgtgtgggcggggcataactccc 385
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 ggcttgagtggtttattggatgtgtgggcggggcataactccc 525