Jatropha Genome Database

JcCB0037361.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0037361.10 - phase: 0 /partial
         (720 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c07306                                                            827   0.0  

>KJC_c07306 
          Length = 473

 Score =  827 bits (417), Expect = 0.0
 Identities = 417/417 (100%)
 Strand = Plus / Minus

                                                                       
Query: 304 gttgatcagccatctgacagtacaaggaaagagagtagcacaaagaagagtttactttcc 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 gttgatcagccatctgacagtacaaggaaagagagtagcacaaagaagagtttactttcc 414

                                                                       
Query: 364 aggggcaaacaatctcttagagccatttatcaagctgcgagaatcggtggatatcgaggt 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 aggggcaaacaatctcttagagccatttatcaagctgcgagaatcggtggatatcgaggt 354

                                                                       
Query: 424 caagagcaaaagttcgaatctgacatgaaatatactgatgaaagtgatgataattttgat 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 caagagcaaaagttcgaatctgacatgaaatatactgatgaaagtgatgataattttgat 294

                                                                       
Query: 484 ggacttgagatgaagcatatgcagaatgtggagcaggctgttgaagccagagagcttcca 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 ggacttgagatgaagcatatgcagaatgtggagcaggctgttgaagccagagagcttcca 234

                                                                       
Query: 544 gatgtttctgagccttcattgcttctgtcggagaaagcaagaaatgccctttatgcttcc 603
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 233 gatgtttctgagccttcattgcttctgtcggagaaagcaagaaatgccctttatgcttcc 174

                                                                       
Query: 604 cttccagcccttgttcaagggaggaaatggttattgctttacagtacatggaggcatggg 663
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 173 cttccagcccttgttcaagggaggaaatggttattgctttacagtacatggaggcatggg 114

                                                                    
Query: 664 atatcacttgcaaccttatatagaagaagcatgctttggcctggactgagcctgctg 720
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113 atatcacttgcaaccttatatagaagaagcatgctttggcctggactgagcctgctg 57