Jatropha Genome Database

JcCB0035141.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0035141.10 - phase: 0 /partial
         (1683 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c09098                                                            238   4e-62

>KJC_c09098 
          Length = 398

 Score =  238 bits (120), Expect = 4e-62
 Identities = 127/128 (99%), Gaps = 1/128 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggaatcaacaccaaagtcgaggcctattcacatcaagtgtgattcttcaaaaccaagt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 272 atggaatcaacaccaaagtcgaggcctattcacatcaagtgtgattcttcaaaacca-gt 330

                                                                       
Query: 61  tctgcttggaattggttggagaggtggatatccgtttcatcagcagcaccaacaccacaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 tctgcttggaattggttggagaggtggatatccgtttcatcagcagcaccaacaccacaa 390

                   
Query: 121 ccaaattt 128
           ||||||||
Sbjct: 391 ccaaattt 398